RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
THUMPD2-201ENST00000378727 MUC12Q9UKN1 5478 aa6.05□□□□□ -1.44
THUMPD2-201ENST00000378727 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
THUMPD2-201ENST00000378727 SYNE2Q8WXH0 6885 aaKnown RBP6□□□□□ -1.45
THUMPD2-201ENST00000378727 KRTAP9-6A0A140TA67 174 aa5.99□□□□□ -1.45
THUMPD2-201ENST00000378727 KRTAP19-3Q7Z4W3 81 aa5.99□□□□□ -1.45
THUMPD2-201ENST00000378727 H3BS24 57 aa5.98□□□□□ -1.45
THUMPD2-201ENST00000378727 KRTAP5-9P26371 169 aa5.95□□□□□ -1.46
THUMPD2-201ENST00000378727 MT1GP13640 62 aa5.93□□□□□ -1.46
THUMPD2-201ENST00000378727 MT1MQ8N339 61 aa5.9□□□□□ -1.47
THUMPD2-201ENST00000378727 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.89□□□□□ -1.47
THUMPD2-201ENST00000378727 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
THUMPD2-201ENST00000378727 KRTAP9-6A8MVA2 160 aa5.88□□□□□ -1.47
THUMPD2-201ENST00000378727 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
THUMPD2-201ENST00000378727 LCE1AQ5T7P2 110 aa5.79□□□□□ -1.48
THUMPD2-201ENST00000378727 KRTAP6-3Q3LI67 103 aa5.77□□□□□ -1.49
THUMPD2-201ENST00000378727 MDN1Q9NU22 5596 aa5.75□□□□□ -1.49
THUMPD2-201ENST00000378727 SPRR2EP22531 72 aa5.71□□□□□ -1.5
THUMPD2-201ENST00000378727 SPRR2BP35325 72 aa5.71□□□□□ -1.5
THUMPD2-201ENST00000378727 SPRR2AP35326 72 aa5.71□□□□□ -1.5
THUMPD2-201ENST00000378727 DSTQ03001 7570 aaKnown RBP5.6□□□□□ -1.51
THUMPD2-201ENST00000378727 KRTAP9-7A8MTY7 169 aa5.51□□□□□ -1.53
THUMPD2-201ENST00000378727 SPRR2DP22532 72 aa5.49□□□□□ -1.53
THUMPD2-201ENST00000378727 A0A0A0MQY5 61 aa5.47□□□□□ -1.53
THUMPD2-201ENST00000378727 KRTAP2-3P0C7H8 128 aa5.44□□□□□ -1.54
THUMPD2-201ENST00000378727 KRTAP2-4Q9BYR9 128 aa5.44□□□□□ -1.54
THUMPD2-201ENST00000378727 KRTAP2-1Q9BYU5 128 aa5.44□□□□□ -1.54
THUMPD2-201ENST00000378727 NEBP20929 6669 aa5.36□□□□□ -1.55
THUMPD2-201ENST00000378727 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
THUMPD2-201ENST00000378727 KRTAP5-5Q701N2 237 aaPredicted RBP5.32□□□□□ -1.56
THUMPD2-201ENST00000378727 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
THUMPD2-201ENST00000378727 MT1AP04731 61 aa5.22□□□□□ -1.57
THUMPD2-201ENST00000378727 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.58
THUMPD2-201ENST00000378727 KRTAP9-9Q9BYP9 154 aa5.21□□□□□ -1.58
THUMPD2-201ENST00000378727 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
THUMPD2-201ENST00000378727 INE1O15225 51 aa5.07□□□□□ -1.6
THUMPD2-201ENST00000378727 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
THUMPD2-201ENST00000378727 KRTAP5-4Q6L8H1 288 aa5.01□□□□□ -1.61
THUMPD2-201ENST00000378727 LCE1DQ5T752 114 aa4.99□□□□□ -1.61
THUMPD2-201ENST00000378727 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
THUMPD2-201ENST00000378727 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
THUMPD2-201ENST00000378727 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
THUMPD2-201ENST00000378727 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
THUMPD2-201ENST00000378727 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
THUMPD2-201ENST00000378727 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
THUMPD2-201ENST00000378727 MT4P47944 62 aa4.79□□□□□ -1.64
THUMPD2-201ENST00000378727 KRTAP6-2Q3LI66 62 aa4.77□□□□□ -1.65
THUMPD2-201ENST00000378727 MT3P25713 68 aa4.7□□□□□ -1.66
THUMPD2-201ENST00000378727 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
THUMPD2-201ENST00000378727 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
THUMPD2-201ENST00000378727 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
THUMPD2-201ENST00000378727 HMCN1Q96RW7 5635 aa4.62□□□□□ -1.67
THUMPD2-201ENST00000378727 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
THUMPD2-201ENST00000378727 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
THUMPD2-201ENST00000378727 LCE3EQ5T5B0 92 aa4.5□□□□□ -1.69
THUMPD2-201ENST00000378727 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
THUMPD2-201ENST00000378727 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
THUMPD2-201ENST00000378727 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
THUMPD2-201ENST00000378727 PRM1P04553 51 aa4.01□□□□□ -1.77
THUMPD2-201ENST00000378727 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
THUMPD2-201ENST00000378727 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
THUMPD2-201ENST00000378727 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
THUMPD2-201ENST00000378727 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
THUMPD2-201ENST00000378727 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
THUMPD2-201ENST00000378727 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
THUMPD2-201ENST00000378727 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
THUMPD2-201ENST00000378727 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
THUMPD2-201ENST00000378727 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
THUMPD2-201ENST00000378727 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
THUMPD2-201ENST00000378727 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.88
THUMPD2-201ENST00000378727 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
THUMPD2-201ENST00000378727 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
THUMPD2-201ENST00000378727 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
THUMPD2-201ENST00000378727 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
THUMPD2-201ENST00000378727 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
THUMPD2-201ENST00000378727 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
THUMPD2-201ENST00000378727 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.01
THUMPD2-201ENST00000378727 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 220.5 ms