RNA–Protein interactions for RNA: ENST00000378555.7

PODXL-202, Transcript of podocalyxin like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PODXL, Length 2,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PODXL-202ENST00000378555 KRTAP4-3Q9BYR4 195 aa5.82□□□□□ -1.48
PODXL-202ENST00000378555 KRTAP2-3P0C7H8 128 aa5.81□□□□□ -1.48
PODXL-202ENST00000378555 KRTAP2-4Q9BYR9 128 aa5.81□□□□□ -1.48
PODXL-202ENST00000378555 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
PODXL-202ENST00000378555 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
PODXL-202ENST00000378555 MUC12Q9UKN1 5478 aa5.79□□□□□ -1.48
PODXL-202ENST00000378555 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
PODXL-202ENST00000378555 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
PODXL-202ENST00000378555 KRTAP19-3Q7Z4W3 81 aa5.74□□□□□ -1.49
PODXL-202ENST00000378555 MT1MQ8N339 61 aa5.72□□□□□ -1.49
PODXL-202ENST00000378555 MACF1Q9UPN3 7388 aaKnown RBP5.69□□□□□ -1.5
PODXL-202ENST00000378555 MT1GP13640 62 aa5.69□□□□□ -1.5
PODXL-202ENST00000378555 SPRR2FQ96RM1 72 aa5.61□□□□□ -1.51
PODXL-202ENST00000378555 LCE5AQ5TCM9 118 aa5.57□□□□□ -1.52
PODXL-202ENST00000378555 SYNE2Q8WXH0 6885 aaKnown RBP5.54□□□□□ -1.52
PODXL-202ENST00000378555 KRTAP5-9P26371 169 aa5.45□□□□□ -1.54
PODXL-202ENST00000378555 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
PODXL-202ENST00000378555 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.36□□□□□ -1.55
PODXL-202ENST00000378555 MDN1Q9NU22 5596 aa5.34□□□□□ -1.55
PODXL-202ENST00000378555 LCE1AQ5T7P2 110 aa5.28□□□□□ -1.56
PODXL-202ENST00000378555 KRTAP6-3Q3LI67 103 aa5.27□□□□□ -1.57
PODXL-202ENST00000378555 LCE3BQ5TA77 95 aa5.21□□□□□ -1.58
PODXL-202ENST00000378555 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
PODXL-202ENST00000378555 KRTAP9-7A8MTY7 169 aa5.18□□□□□ -1.58
PODXL-202ENST00000378555 SPRR2EP22531 72 aa5.18□□□□□ -1.58
PODXL-202ENST00000378555 SPRR2BP35325 72 aa5.18□□□□□ -1.58
PODXL-202ENST00000378555 SPRR2AP35326 72 aa5.18□□□□□ -1.58
PODXL-202ENST00000378555 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
PODXL-202ENST00000378555 MT1AP04731 61 aa5.1□□□□□ -1.59
PODXL-202ENST00000378555 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.59
PODXL-202ENST00000378555 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
PODXL-202ENST00000378555 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
PODXL-202ENST00000378555 SPRR2DP22532 72 aa4.98□□□□□ -1.61
PODXL-202ENST00000378555 NEBP20929 6669 aa4.95□□□□□ -1.62
PODXL-202ENST00000378555 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
PODXL-202ENST00000378555 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
PODXL-202ENST00000378555 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
PODXL-202ENST00000378555 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
PODXL-202ENST00000378555 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
PODXL-202ENST00000378555 MT3P25713 68 aa4.57□□□□□ -1.68
PODXL-202ENST00000378555 KRTAP20-1Q3LI63 56 aa4.57□□□□□ -1.68
PODXL-202ENST00000378555 PRM1P04553 51 aa4.5□□□□□ -1.69
PODXL-202ENST00000378555 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
PODXL-202ENST00000378555 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
PODXL-202ENST00000378555 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
PODXL-202ENST00000378555 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.7
PODXL-202ENST00000378555 MT4P47944 62 aa4.36□□□□□ -1.71
PODXL-202ENST00000378555 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
PODXL-202ENST00000378555 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
PODXL-202ENST00000378555 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
PODXL-202ENST00000378555 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
PODXL-202ENST00000378555 KRTAP5-3Q6L8H2 238 aa4.13□□□□□ -1.75
PODXL-202ENST00000378555 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
PODXL-202ENST00000378555 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
PODXL-202ENST00000378555 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
PODXL-202ENST00000378555 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.82
PODXL-202ENST00000378555 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
PODXL-202ENST00000378555 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.83
PODXL-202ENST00000378555 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
PODXL-202ENST00000378555 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
PODXL-202ENST00000378555 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
PODXL-202ENST00000378555 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
PODXL-202ENST00000378555 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
PODXL-202ENST00000378555 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
PODXL-202ENST00000378555 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
PODXL-202ENST00000378555 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
PODXL-202ENST00000378555 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
PODXL-202ENST00000378555 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
PODXL-202ENST00000378555 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
PODXL-202ENST00000378555 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
PODXL-202ENST00000378555 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
PODXL-202ENST00000378555 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
PODXL-202ENST00000378555 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
PODXL-202ENST00000378555 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
PODXL-202ENST00000378555 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
PODXL-202ENST00000378555 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
PODXL-202ENST00000378555 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 306 ms