RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
ARHGEF39-201ENST00000378387 KRTAP2-1Q9BYU5 128 aa3.57□□□□□ -1.84
ARHGEF39-201ENST00000378387 KRTAP9-3Q9BYQ3 159 aa3.54□□□□□ -1.84
ARHGEF39-201ENST00000378387 MT1GP13640 62 aa3.47□□□□□ -1.85
ARHGEF39-201ENST00000378387 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.44□□□□□ -1.86
ARHGEF39-201ENST00000378387 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
ARHGEF39-201ENST00000378387 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
ARHGEF39-201ENST00000378387 MT1LQ93083 61 aa3.41□□□□□ -1.86
ARHGEF39-201ENST00000378387 KRTAP9-2Q9BYQ4 174 aa3.41□□□□□ -1.86
ARHGEF39-201ENST00000378387 LCE3BQ5TA77 95 aa3.4□□□□□ -1.86
ARHGEF39-201ENST00000378387 KRTAP9-6A0A140TA67 174 aa3.39□□□□□ -1.87
ARHGEF39-201ENST00000378387 KRTAP4-9Q9BYQ8 210 aa3.35□□□□□ -1.87
ARHGEF39-201ENST00000378387 MT1EP04732 61 aa3.33□□□□□ -1.88
ARHGEF39-201ENST00000378387 SYNE2Q8WXH0 6885 aaKnown RBP3.31□□□□□ -1.88
ARHGEF39-201ENST00000378387 MUC12Q9UKN1 5478 aa3.3□□□□□ -1.88
ARHGEF39-201ENST00000378387 SPRR2FQ96RM1 72 aa3.29□□□□□ -1.88
ARHGEF39-201ENST00000378387 SSPOA2VEC9 5147 aa3.28□□□□□ -1.88
ARHGEF39-201ENST00000378387 PRM1P04553 51 aa3.26□□□□□ -1.89
ARHGEF39-201ENST00000378387 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
ARHGEF39-201ENST00000378387 KRTAP9-4Q9BYQ2 154 aa3.26□□□□□ -1.89
ARHGEF39-201ENST00000378387 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
ARHGEF39-201ENST00000378387 KRTAP19-4Q3LI73 84 aa3.22□□□□□ -1.89
ARHGEF39-201ENST00000378387 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
ARHGEF39-201ENST00000378387 KRTAP9-7A8MTY7 169 aa3.19□□□□□ -1.9
ARHGEF39-201ENST00000378387 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
ARHGEF39-201ENST00000378387 MACF1Q9UPN3 7388 aaKnown RBP3.15□□□□□ -1.9
ARHGEF39-201ENST00000378387 MT1MQ8N339 61 aa3.13□□□□□ -1.91
ARHGEF39-201ENST00000378387 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
ARHGEF39-201ENST00000378387 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
ARHGEF39-201ENST00000378387 KRTAP19-6Q3LI70 58 aa3.04□□□□□ -1.92
ARHGEF39-201ENST00000378387 LCE1DQ5T752 114 aa3.03□□□□□ -1.92
ARHGEF39-201ENST00000378387 SPRR2EP22531 72 aa3.01□□□□□ -1.93
ARHGEF39-201ENST00000378387 SPRR2BP35325 72 aa3.01□□□□□ -1.93
ARHGEF39-201ENST00000378387 SPRR2AP35326 72 aa3.01□□□□□ -1.93
ARHGEF39-201ENST00000378387 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
ARHGEF39-201ENST00000378387 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
ARHGEF39-201ENST00000378387 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
ARHGEF39-201ENST00000378387 LCE1AQ5T7P2 110 aa2.94□□□□□ -1.94
ARHGEF39-201ENST00000378387 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
ARHGEF39-201ENST00000378387 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
ARHGEF39-201ENST00000378387 MT1AP04731 61 aa2.9□□□□□ -1.94
ARHGEF39-201ENST00000378387 KRTAP6-3Q3LI67 103 aa2.89□□□□□ -1.95
ARHGEF39-201ENST00000378387 SPRR2DP22532 72 aa2.87□□□□□ -1.95
ARHGEF39-201ENST00000378387 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
ARHGEF39-201ENST00000378387 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
ARHGEF39-201ENST00000378387 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
ARHGEF39-201ENST00000378387 LCE5AQ5TCM9 118 aa2.8□□□□□ -1.96
ARHGEF39-201ENST00000378387 KRTAP2-2Q9BYT5 123 aa2.79□□□□□ -1.96
ARHGEF39-201ENST00000378387 KRTAP5-9P26371 169 aa2.73□□□□□ -1.97
ARHGEF39-201ENST00000378387 MT4P47944 62 aa2.71□□□□□ -1.98
ARHGEF39-201ENST00000378387 MT3P25713 68 aa2.65□□□□□ -1.99
ARHGEF39-201ENST00000378387 LCE4AQ5TA78 99 aa2.62□□□□□ -1.99
ARHGEF39-201ENST00000378387 KRTAP20-1Q3LI63 56 aa2.54□□□□□ -2
ARHGEF39-201ENST00000378387 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
ARHGEF39-201ENST00000378387 NEBP20929 6669 aa2.51□□□□□ -2.01
ARHGEF39-201ENST00000378387 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
ARHGEF39-201ENST00000378387 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
ARHGEF39-201ENST00000378387 KRTAP5-4Q6L8H1 288 aa2.29□□□□□ -2.04
ARHGEF39-201ENST00000378387 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
ARHGEF39-201ENST00000378387 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
ARHGEF39-201ENST00000378387 KRTAP20-2Q3LI61 65 aa2.18□□□□□ -2.06
ARHGEF39-201ENST00000378387 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
ARHGEF39-201ENST00000378387 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
ARHGEF39-201ENST00000378387 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
ARHGEF39-201ENST00000378387 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
ARHGEF39-201ENST00000378387 AHNAK2Q8IVF2 5795 aa1.95□□□□□ -2.1
ARHGEF39-201ENST00000378387 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
ARHGEF39-201ENST00000378387 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
ARHGEF39-201ENST00000378387 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
ARHGEF39-201ENST00000378387 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
ARHGEF39-201ENST00000378387 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
ARHGEF39-201ENST00000378387 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
ARHGEF39-201ENST00000378387 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
ARHGEF39-201ENST00000378387 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
ARHGEF39-201ENST00000378387 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
ARHGEF39-201ENST00000378387 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
ARHGEF39-201ENST00000378387 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 104 ms