RNA–Protein interactions for RNA: ENST00000378292.7

TPM2-203, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM2, Length 2,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-203ENST00000378292 KRTAP19-3Q7Z4W3 81 aa8.99□□□□□ -0.97
TPM2-203ENST00000378292 MT1GP13640 62 aa8.93□□□□□ -0.98
TPM2-203ENST00000378292 SPRR2FQ96RM1 72 aa8.92□□□□□ -0.98
TPM2-203ENST00000378292 MACF1Q9UPN3 7388 aaKnown RBP8.91□□□□□ -0.98
TPM2-203ENST00000378292 MT1MQ8N339 61 aa8.9□□□□□ -0.99
TPM2-203ENST00000378292 KRTAP4-3Q9BYR4 195 aa8.87□□□□□ -0.99
TPM2-203ENST00000378292 CRCT1Q9UGL9 99 aa8.84□□□□□ -0.99
TPM2-203ENST00000378292 LCE5AQ5TCM9 118 aa8.77□□□□□ -1.01
TPM2-203ENST00000378292 LOC100996750A0A140TA64 210 aa8.7□□□□□ -1.02
TPM2-203ENST00000378292 KRTAP2-3P0C7H8 128 aa8.68□□□□□ -1.02
TPM2-203ENST00000378292 KRTAP2-4Q9BYR9 128 aa8.68□□□□□ -1.02
TPM2-203ENST00000378292 KRTAP2-1Q9BYU5 128 aa8.68□□□□□ -1.02
TPM2-203ENST00000378292 SYNE2Q8WXH0 6885 aaKnown RBP8.6□□□□□ -1.03
TPM2-203ENST00000378292 KRTAP5-9P26371 169 aa8.55□□□□□ -1.04
TPM2-203ENST00000378292 INE1O15225 51 aa8.51□□□□□ -1.05
TPM2-203ENST00000378292 MDN1Q9NU22 5596 aa8.44□□□□□ -1.06
TPM2-203ENST00000378292 DSTQ03001 7570 aaKnown RBP8.42□□□□□ -1.06
TPM2-203ENST00000378292 LCE1AQ5T7P2 110 aa8.42□□□□□ -1.06
TPM2-203ENST00000378292 KRTAP9-6A0A140TA67 174 aa8.41□□□□□ -1.06
TPM2-203ENST00000378292 SPRR2EP22531 72 aa8.29□□□□□ -1.08
TPM2-203ENST00000378292 SPRR2BP35325 72 aa8.29□□□□□ -1.08
TPM2-203ENST00000378292 SPRR2AP35326 72 aa8.29□□□□□ -1.08
TPM2-203ENST00000378292 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.15□□□□□ -1.1
TPM2-203ENST00000378292 KRTAP6-3Q3LI67 103 aa8.1□□□□□ -1.11
TPM2-203ENST00000378292 SPRR2DP22532 72 aa7.95□□□□□ -1.14
TPM2-203ENST00000378292 KRTAP6-1Q3LI64 71 aa7.95□□□□□ -1.14
TPM2-203ENST00000378292 KRTAP5-5Q701N2 237 aaPredicted RBP7.95□□□□□ -1.14
TPM2-203ENST00000378292 MT1AP04731 61 aa7.93□□□□□ -1.14
TPM2-203ENST00000378292 LCE3BQ5TA77 95 aa7.89□□□□□ -1.15
TPM2-203ENST00000378292 KRTAP9-7A8MTY7 169 aa7.72□□□□□ -1.17
TPM2-203ENST00000378292 SYNE1Q8NF91 8797 aaKnown RBP7.62□□□□□ -1.19
TPM2-203ENST00000378292 KRTAP4-9Q9BYQ8 210 aa7.6□□□□□ -1.19
TPM2-203ENST00000378292 KRTAP12-4P60329 112 aa7.54□□□□□ -1.2
TPM2-203ENST00000378292 NEBP20929 6669 aa7.51□□□□□ -1.21
TPM2-203ENST00000378292 KRTAP9-4Q9BYQ2 154 aa7.5□□□□□ -1.21
TPM2-203ENST00000378292 LCE3DQ9BYE3 92 aa7.32□□□□□ -1.24
TPM2-203ENST00000378292 KRTAP5-4Q6L8H1 288 aa7.28□□□□□ -1.24
TPM2-203ENST00000378292 KRTAP6-2Q3LI66 62 aa7.22□□□□□ -1.25
TPM2-203ENST00000378292 LCE3EQ5T5B0 92 aa7.17□□□□□ -1.26
TPM2-203ENST00000378292 MT3P25713 68 aa7.15□□□□□ -1.26
TPM2-203ENST00000378292 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
TPM2-203ENST00000378292 LCE4AQ5TA78 99 aa6.97□□□□□ -1.29
TPM2-203ENST00000378292 MT4P47944 62 aa6.96□□□□□ -1.3
TPM2-203ENST00000378292 KRTAP2-2Q9BYT5 123 aa6.86□□□□□ -1.31
TPM2-203ENST00000378292 KRTAP20-2Q3LI61 65 aa6.82□□□□□ -1.32
TPM2-203ENST00000378292 KRTAP20-1Q3LI63 56 aa6.79□□□□□ -1.32
TPM2-203ENST00000378292 OBSCNQ5VST9 7968 aa6.75□□□□□ -1.33
TPM2-203ENST00000378292 KRTAP5-2Q701N4 177 aa6.7□□□□□ -1.34
TPM2-203ENST00000378292 LCE1DQ5T752 114 aa6.7□□□□□ -1.34
TPM2-203ENST00000378292 HMCN1Q96RW7 5635 aa6.69□□□□□ -1.34
TPM2-203ENST00000378292 PRM1P04553 51 aa6.58□□□□□ -1.36
TPM2-203ENST00000378292 KRTAP5-3Q6L8H2 238 aa6.53□□□□□ -1.36
TPM2-203ENST00000378292 LCE1EQ5T753 118 aa6.03□□□□□ -1.44
TPM2-203ENST00000378292 MUC5ACP98088 5654 aa5.9□□□□□ -1.46
TPM2-203ENST00000378292 LCE1BQ5T7P3 118 aa5.81□□□□□ -1.48
TPM2-203ENST00000378292 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
TPM2-203ENST00000378292 KRTAP5-1Q6L8H4 278 aa5.75□□□□□ -1.49
TPM2-203ENST00000378292 KRTAP5-10Q6L8G5 202 aa5.71□□□□□ -1.5
TPM2-203ENST00000378292 KRTAP4-2Q9BYR5 136 aa5.68□□□□□ -1.5
TPM2-203ENST00000378292 LCE1CQ5T751 118 aa5.66□□□□□ -1.5
TPM2-203ENST00000378292 AHNAK2Q8IVF2 5795 aa5.6□□□□□ -1.51
TPM2-203ENST00000378292 KRTAP5-8O75690 187 aa5.54□□□□□ -1.52
TPM2-203ENST00000378292 KRTAP5-7Q6L8G8 165 aa5.42□□□□□ -1.54
TPM2-203ENST00000378292 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.32□□□□□ -1.56
TPM2-203ENST00000378292 KRTAP21-2Q3LI59 83 aa5.17□□□□□ -1.58
TPM2-203ENST00000378292 GPR98Q8WXG9 6306 aa5.12□□□□□ -1.59
TPM2-203ENST00000378292 KRTAP5-11Q6L8G4 156 aa4.93□□□□□ -1.62
TPM2-203ENST00000378292 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
TPM2-203ENST00000378292 MUC5BQ9HC84 5762 aaPredicted RBP4.83□□□□□ -1.64
TPM2-203ENST00000378292 LCE1FQ5T754 118 aa4.7□□□□□ -1.66
TPM2-203ENST00000378292 KRTAP4-4Q9BYR3 166 aa4.66□□□□□ -1.66
TPM2-203ENST00000378292 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
TPM2-203ENST00000378292 PHGR1C9JFL3 82 aa4.25□□□□□ -1.73
TPM2-203ENST00000378292 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
TPM2-203ENST00000378292 KRTAP21-1Q3LI58 79 aa4.08□□□□□ -1.76
TPM2-203ENST00000378292 MUC19Q7Z5P9 8384 aa4.07□□□□□ -1.76
TPM2-203ENST00000378292 MUC16Q8WXI7 14507 aa2.82□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 128 ms