RNA–Protein interactions for RNA: ENST00000378251.2

LRRC47-201, Transcript of leucine rich repeat containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC47, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-201ENST00000378251 SPRR2DP22532 72 aa5.53□□□□□ -1.52
LRRC47-201ENST00000378251 MT1EP04732 61 aa5.47□□□□□ -1.53
LRRC47-201ENST00000378251 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.53
LRRC47-201ENST00000378251 KRTAP19-3Q7Z4W3 81 aa5.45□□□□□ -1.54
LRRC47-201ENST00000378251 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
LRRC47-201ENST00000378251 MT1LQ93083 61 aa5.44□□□□□ -1.54
LRRC47-201ENST00000378251 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
LRRC47-201ENST00000378251 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
LRRC47-201ENST00000378251 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.55
LRRC47-201ENST00000378251 FCGBPQ9Y6R7 5405 aaPredicted RBP5.34□□□□□ -1.56
LRRC47-201ENST00000378251 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
LRRC47-201ENST00000378251 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
LRRC47-201ENST00000378251 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
LRRC47-201ENST00000378251 KMT2DO14686 5537 aa5.29□□□□□ -1.56
LRRC47-201ENST00000378251 MT1MQ8N339 61 aa5.26□□□□□ -1.57
LRRC47-201ENST00000378251 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
LRRC47-201ENST00000378251 SSPOA2VEC9 5147 aa5.17□□□□□ -1.58
LRRC47-201ENST00000378251 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
LRRC47-201ENST00000378251 MACF1Q9UPN3 7388 aaKnown RBP5.11□□□□□ -1.59
LRRC47-201ENST00000378251 MUC12Q9UKN1 5478 aa5.09□□□□□ -1.59
LRRC47-201ENST00000378251 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
LRRC47-201ENST00000378251 MT4P47944 62 aa5.02□□□□□ -1.61
LRRC47-201ENST00000378251 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
LRRC47-201ENST00000378251 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
LRRC47-201ENST00000378251 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
LRRC47-201ENST00000378251 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
LRRC47-201ENST00000378251 LCE3EQ5T5B0 92 aa4.83□□□□□ -1.64
LRRC47-201ENST00000378251 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
LRRC47-201ENST00000378251 KRTAP2-3P0C7H8 128 aa4.78□□□□□ -1.64
LRRC47-201ENST00000378251 KRTAP2-4Q9BYR9 128 aa4.78□□□□□ -1.64
LRRC47-201ENST00000378251 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
LRRC47-201ENST00000378251 KRTAP20-1Q3LI63 56 aa4.73□□□□□ -1.65
LRRC47-201ENST00000378251 MT3P25713 68 aa4.73□□□□□ -1.65
LRRC47-201ENST00000378251 MT1AP04731 61 aa4.71□□□□□ -1.66
LRRC47-201ENST00000378251 MDN1Q9NU22 5596 aa4.7□□□□□ -1.66
LRRC47-201ENST00000378251 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
LRRC47-201ENST00000378251 PRM1P04553 51 aa4.64□□□□□ -1.67
LRRC47-201ENST00000378251 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
LRRC47-201ENST00000378251 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
LRRC47-201ENST00000378251 KRTAP5-9P26371 169 aa4.54□□□□□ -1.68
LRRC47-201ENST00000378251 LCE1DQ5T752 114 aa4.53□□□□□ -1.69
LRRC47-201ENST00000378251 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
LRRC47-201ENST00000378251 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
LRRC47-201ENST00000378251 NEBP20929 6669 aa4.47□□□□□ -1.69
LRRC47-201ENST00000378251 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
LRRC47-201ENST00000378251 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
LRRC47-201ENST00000378251 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
LRRC47-201ENST00000378251 MUC19Q7Z5P9 8384 aa4.09□□□□□ -1.75
LRRC47-201ENST00000378251 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
LRRC47-201ENST00000378251 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
LRRC47-201ENST00000378251 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
LRRC47-201ENST00000378251 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
LRRC47-201ENST00000378251 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
LRRC47-201ENST00000378251 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.82
LRRC47-201ENST00000378251 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
LRRC47-201ENST00000378251 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
LRRC47-201ENST00000378251 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
LRRC47-201ENST00000378251 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
LRRC47-201ENST00000378251 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
LRRC47-201ENST00000378251 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
LRRC47-201ENST00000378251 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
LRRC47-201ENST00000378251 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
LRRC47-201ENST00000378251 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.87
LRRC47-201ENST00000378251 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
LRRC47-201ENST00000378251 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
LRRC47-201ENST00000378251 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
LRRC47-201ENST00000378251 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
LRRC47-201ENST00000378251 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
LRRC47-201ENST00000378251 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
LRRC47-201ENST00000378251 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
LRRC47-201ENST00000378251 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
LRRC47-201ENST00000378251 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
LRRC47-201ENST00000378251 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
LRRC47-201ENST00000378251 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
LRRC47-201ENST00000378251 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
LRRC47-201ENST00000378251 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
LRRC47-201ENST00000378251 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 161.9 ms