RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 PCLOQ9Y6V0 5065 aa4.37□□□□□ -1.71
EXT1-201ENST00000378204 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
EXT1-201ENST00000378204 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
EXT1-201ENST00000378204 HYDINQ4G0P3 5121 aa4.32□□□□□ -1.72
EXT1-201ENST00000378204 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
EXT1-201ENST00000378204 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
EXT1-201ENST00000378204 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
EXT1-201ENST00000378204 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
EXT1-201ENST00000378204 MT1AP04731 61 aa4.27□□□□□ -1.73
EXT1-201ENST00000378204 HERC1Q15751 4861 aa4.18□□□□□ -1.74
EXT1-201ENST00000378204 LCE2AQ5TA79 106 aaPredicted RBP4.16□□□□□ -1.74
EXT1-201ENST00000378204 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.74
EXT1-201ENST00000378204 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.74
EXT1-201ENST00000378204 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
EXT1-201ENST00000378204 HMCN2Q8NDA2 5059 aa4.09□□□□□ -1.76
EXT1-201ENST00000378204 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
EXT1-201ENST00000378204 KRTAP9-6A0A140TA67 174 aa4.07□□□□□ -1.76
EXT1-201ENST00000378204 EPPK1P58107 5090 aaKnown RBP4.05□□□□□ -1.76
EXT1-201ENST00000378204 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
EXT1-201ENST00000378204 BIRC6Q9NR09 4857 aa4.02□□□□□ -1.77
EXT1-201ENST00000378204 KRTAP20-1Q3LI63 56 aa4.02□□□□□ -1.77
EXT1-201ENST00000378204 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
EXT1-201ENST00000378204 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
EXT1-201ENST00000378204 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
EXT1-201ENST00000378204 KRTAP9-7A8MTY7 169 aa3.92□□□□□ -1.78
EXT1-201ENST00000378204 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
EXT1-201ENST00000378204 LCE4AQ5TA78 99 aa3.91□□□□□ -1.78
EXT1-201ENST00000378204 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
EXT1-201ENST00000378204 UBR4Q5T4S7 5183 aa3.87□□□□□ -1.79
EXT1-201ENST00000378204 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
EXT1-201ENST00000378204 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
EXT1-201ENST00000378204 MUC2Q02817 5179 aa3.84□□□□□ -1.79
EXT1-201ENST00000378204 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
EXT1-201ENST00000378204 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
EXT1-201ENST00000378204 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
EXT1-201ENST00000378204 FAT4Q6V0I7 4981 aa3.79□□□□□ -1.8
EXT1-201ENST00000378204 RNF213Q63HN8 5207 aa3.75□□□□□ -1.81
EXT1-201ENST00000378204 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.74□□□□□ -1.81
EXT1-201ENST00000378204 ABCA13Q86UQ4 5058 aa3.62□□□□□ -1.83
EXT1-201ENST00000378204 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
EXT1-201ENST00000378204 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
EXT1-201ENST00000378204 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
EXT1-201ENST00000378204 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
EXT1-201ENST00000378204 KMT2DO14686 5537 aa3.34□□□□□ -1.88
EXT1-201ENST00000378204 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
EXT1-201ENST00000378204 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
EXT1-201ENST00000378204 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
EXT1-201ENST00000378204 USH2AO75445 5202 aa3.24□□□□□ -1.89
EXT1-201ENST00000378204 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
EXT1-201ENST00000378204 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.9
EXT1-201ENST00000378204 NEBP20929 6669 aa3.06□□□□□ -1.92
EXT1-201ENST00000378204 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
EXT1-201ENST00000378204 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
EXT1-201ENST00000378204 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
EXT1-201ENST00000378204 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
EXT1-201ENST00000378204 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
EXT1-201ENST00000378204 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
EXT1-201ENST00000378204 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
EXT1-201ENST00000378204 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
EXT1-201ENST00000378204 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
EXT1-201ENST00000378204 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
EXT1-201ENST00000378204 MUC5ACP98088 5654 aa2.55□□□□□ -2
EXT1-201ENST00000378204 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
EXT1-201ENST00000378204 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
EXT1-201ENST00000378204 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
EXT1-201ENST00000378204 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
EXT1-201ENST00000378204 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
EXT1-201ENST00000378204 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
EXT1-201ENST00000378204 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
EXT1-201ENST00000378204 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
EXT1-201ENST00000378204 KRTAP5-1Q6L8H4 278 aa2.06□□□□□ -2.08
EXT1-201ENST00000378204 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
EXT1-201ENST00000378204 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
EXT1-201ENST00000378204 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
EXT1-201ENST00000378204 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
EXT1-201ENST00000378204 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
EXT1-201ENST00000378204 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 64.2 ms