RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 KRTAP9-2Q9BYQ4 174 aa5.92□□□□□ -1.46
TDP2-202ENST00000378198 MT1GP13640 62 aa5.92□□□□□ -1.46
TDP2-202ENST00000378198 KRTAP19-3Q7Z4W3 81 aa5.91□□□□□ -1.46
TDP2-202ENST00000378198 MT1MQ8N339 61 aa5.9□□□□□ -1.47
TDP2-202ENST00000378198 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.47
TDP2-202ENST00000378198 FSIP2Q5CZC0 6907 aa5.89□□□□□ -1.47
TDP2-202ENST00000378198 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
TDP2-202ENST00000378198 FCGBPQ9Y6R7 5405 aaPredicted RBP5.76□□□□□ -1.49
TDP2-202ENST00000378198 LCE5AQ5TCM9 118 aa5.71□□□□□ -1.5
TDP2-202ENST00000378198 CRCT1Q9UGL9 99 aa5.68□□□□□ -1.5
TDP2-202ENST00000378198 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
TDP2-202ENST00000378198 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
TDP2-202ENST00000378198 KRTAP9-6A0A140TA67 174 aa5.6□□□□□ -1.51
TDP2-202ENST00000378198 KRTAP12-4P60329 112 aa5.46□□□□□ -1.53
TDP2-202ENST00000378198 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
TDP2-202ENST00000378198 DSTQ03001 7570 aaKnown RBP5.35□□□□□ -1.55
TDP2-202ENST00000378198 MACF1Q9UPN3 7388 aaKnown RBP5.35□□□□□ -1.55
TDP2-202ENST00000378198 MT1AP04731 61 aa5.35□□□□□ -1.55
TDP2-202ENST00000378198 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
TDP2-202ENST00000378198 KRTAP5-9P26371 169 aa5.3□□□□□ -1.56
TDP2-202ENST00000378198 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
TDP2-202ENST00000378198 KRTAP4-9Q9BYQ8 210 aa5.24□□□□□ -1.57
TDP2-202ENST00000378198 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
TDP2-202ENST00000378198 KRTAP5-5Q701N2 237 aaPredicted RBP5.22□□□□□ -1.57
TDP2-202ENST00000378198 SPRR2EP22531 72 aa5.16□□□□□ -1.58
TDP2-202ENST00000378198 SPRR2BP35325 72 aa5.16□□□□□ -1.58
TDP2-202ENST00000378198 SPRR2AP35326 72 aa5.16□□□□□ -1.58
TDP2-202ENST00000378198 SYNE2Q8WXH0 6885 aaKnown RBP5.16□□□□□ -1.58
TDP2-202ENST00000378198 LCE3DQ9BYE3 92 aa5.15□□□□□ -1.59
TDP2-202ENST00000378198 LCE3EQ5T5B0 92 aa5.09□□□□□ -1.59
TDP2-202ENST00000378198 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
TDP2-202ENST00000378198 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
TDP2-202ENST00000378198 MDN1Q9NU22 5596 aa5.07□□□□□ -1.6
TDP2-202ENST00000378198 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
TDP2-202ENST00000378198 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
TDP2-202ENST00000378198 SPRR2DP22532 72 aa4.95□□□□□ -1.62
TDP2-202ENST00000378198 KRTAP6-3Q3LI67 103 aa4.92□□□□□ -1.62
TDP2-202ENST00000378198 PRM1P04553 51 aa4.82□□□□□ -1.64
TDP2-202ENST00000378198 MT3P25713 68 aa4.79□□□□□ -1.64
TDP2-202ENST00000378198 KRTAP6-2Q3LI66 62 aa4.77□□□□□ -1.65
TDP2-202ENST00000378198 NEBP20929 6669 aa4.71□□□□□ -1.66
TDP2-202ENST00000378198 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
TDP2-202ENST00000378198 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
TDP2-202ENST00000378198 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.7
TDP2-202ENST00000378198 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
TDP2-202ENST00000378198 MT4P47944 62 aa4.31□□□□□ -1.72
TDP2-202ENST00000378198 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
TDP2-202ENST00000378198 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
TDP2-202ENST00000378198 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
TDP2-202ENST00000378198 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
TDP2-202ENST00000378198 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
TDP2-202ENST00000378198 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
TDP2-202ENST00000378198 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
TDP2-202ENST00000378198 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
TDP2-202ENST00000378198 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
TDP2-202ENST00000378198 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
TDP2-202ENST00000378198 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
TDP2-202ENST00000378198 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
TDP2-202ENST00000378198 KRTAP5-10Q6L8G5 202 aa3.76□□□□□ -1.81
TDP2-202ENST00000378198 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
TDP2-202ENST00000378198 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
TDP2-202ENST00000378198 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
TDP2-202ENST00000378198 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.82
TDP2-202ENST00000378198 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
TDP2-202ENST00000378198 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
TDP2-202ENST00000378198 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
TDP2-202ENST00000378198 KRTAP5-8O75690 187 aa3.4□□□□□ -1.86
TDP2-202ENST00000378198 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
TDP2-202ENST00000378198 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
TDP2-202ENST00000378198 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
TDP2-202ENST00000378198 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
TDP2-202ENST00000378198 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
TDP2-202ENST00000378198 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
TDP2-202ENST00000378198 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
TDP2-202ENST00000378198 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
TDP2-202ENST00000378198 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
TDP2-202ENST00000378198 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 112.3 ms