RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 LCE3DQ9BYE3 92 aa6.33□□□□□ -1.4
PCDH8-202ENST00000377942 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
PCDH8-202ENST00000377942 UBR4Q5T4S7 5183 aa6.3□□□□□ -1.4
PCDH8-202ENST00000377942 LCE3EQ5T5B0 92 aa6.24□□□□□ -1.41
PCDH8-202ENST00000377942 KRTAP9-6A0A140TA67 174 aa6.12□□□□□ -1.43
PCDH8-202ENST00000377942 HMCN2Q8NDA2 5059 aa6.12□□□□□ -1.43
PCDH8-202ENST00000377942 KRTAP19-7Q3SYF9 63 aa6.12□□□□□ -1.43
PCDH8-202ENST00000377942 MT3P25713 68 aa6.09□□□□□ -1.43
PCDH8-202ENST00000377942 KRTAP4-3Q9BYR4 195 aa5.98□□□□□ -1.45
PCDH8-202ENST00000377942 MT4P47944 62 aa5.95□□□□□ -1.46
PCDH8-202ENST00000377942 SYNE1Q8NF91 8797 aaKnown RBP5.95□□□□□ -1.46
PCDH8-202ENST00000377942 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
PCDH8-202ENST00000377942 FSIP2Q5CZC0 6907 aa5.93□□□□□ -1.46
PCDH8-202ENST00000377942 LCE1AQ5T7P2 110 aa5.89□□□□□ -1.47
PCDH8-202ENST00000377942 MT1AP04731 61 aa5.89□□□□□ -1.47
PCDH8-202ENST00000377942 KRTAP6-3Q3LI67 103 aa5.85□□□□□ -1.47
PCDH8-202ENST00000377942 MUC2Q02817 5179 aa5.79□□□□□ -1.48
PCDH8-202ENST00000377942 KRTAP9-7A8MTY7 169 aa5.76□□□□□ -1.49
PCDH8-202ENST00000377942 KRTAP20-1Q3LI63 56 aa5.7□□□□□ -1.5
PCDH8-202ENST00000377942 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.5
PCDH8-202ENST00000377942 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.5
PCDH8-202ENST00000377942 KRTAP2-1Q9BYU5 128 aa5.65□□□□□ -1.5
PCDH8-202ENST00000377942 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.65□□□□□ -1.51
PCDH8-202ENST00000377942 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.51
PCDH8-202ENST00000377942 LCE1DQ5T752 114 aa5.59□□□□□ -1.51
PCDH8-202ENST00000377942 LCE1BQ5T7P3 118 aa5.56□□□□□ -1.52
PCDH8-202ENST00000377942 PRM1P04553 51 aa5.55□□□□□ -1.52
PCDH8-202ENST00000377942 SYNE2Q8WXH0 6885 aaKnown RBP5.53□□□□□ -1.52
PCDH8-202ENST00000377942 LCE4AQ5TA78 99 aa5.5□□□□□ -1.53
PCDH8-202ENST00000377942 KRTAP6-1Q3LI64 71 aa5.44□□□□□ -1.54
PCDH8-202ENST00000377942 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
PCDH8-202ENST00000377942 KRTAP2-2Q9BYT5 123 aa5.44□□□□□ -1.54
PCDH8-202ENST00000377942 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
PCDH8-202ENST00000377942 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.54
PCDH8-202ENST00000377942 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
PCDH8-202ENST00000377942 USH2AO75445 5202 aa5.34□□□□□ -1.55
PCDH8-202ENST00000377942 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.55
PCDH8-202ENST00000377942 KRTAP5-9P26371 169 aa5.13□□□□□ -1.59
PCDH8-202ENST00000377942 FCGBPQ9Y6R7 5405 aaPredicted RBP5.01□□□□□ -1.61
PCDH8-202ENST00000377942 SSPOA2VEC9 5147 aa4.91□□□□□ -1.62
PCDH8-202ENST00000377942 MACF1Q9UPN3 7388 aaKnown RBP4.86□□□□□ -1.63
PCDH8-202ENST00000377942 NEBP20929 6669 aa4.83□□□□□ -1.64
PCDH8-202ENST00000377942 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
PCDH8-202ENST00000377942 KMT2DO14686 5537 aa4.78□□□□□ -1.64
PCDH8-202ENST00000377942 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
PCDH8-202ENST00000377942 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
PCDH8-202ENST00000377942 LCE1FQ5T754 118 aa4.66□□□□□ -1.66
PCDH8-202ENST00000377942 KRTAP20-2Q3LI61 65 aa4.63□□□□□ -1.67
PCDH8-202ENST00000377942 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
PCDH8-202ENST00000377942 MUC12Q9UKN1 5478 aa4.62□□□□□ -1.67
PCDH8-202ENST00000377942 KRTAP4-6Q9BYQ5 205 aa4.62□□□□□ -1.67
PCDH8-202ENST00000377942 MDN1Q9NU22 5596 aa4.53□□□□□ -1.68
PCDH8-202ENST00000377942 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
PCDH8-202ENST00000377942 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
PCDH8-202ENST00000377942 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
PCDH8-202ENST00000377942 MUC19Q7Z5P9 8384 aa4.18□□□□□ -1.74
PCDH8-202ENST00000377942 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
PCDH8-202ENST00000377942 KRTAP4-12Q9BQ66 201 aa3.87□□□□□ -1.79
PCDH8-202ENST00000377942 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
PCDH8-202ENST00000377942 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
PCDH8-202ENST00000377942 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
PCDH8-202ENST00000377942 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
PCDH8-202ENST00000377942 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
PCDH8-202ENST00000377942 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
PCDH8-202ENST00000377942 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
PCDH8-202ENST00000377942 KRTAP5-8O75690 187 aa3.49□□□□□ -1.85
PCDH8-202ENST00000377942 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
PCDH8-202ENST00000377942 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.91
PCDH8-202ENST00000377942 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
PCDH8-202ENST00000377942 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
PCDH8-202ENST00000377942 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.93
PCDH8-202ENST00000377942 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
PCDH8-202ENST00000377942 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.94
PCDH8-202ENST00000377942 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
PCDH8-202ENST00000377942 KRTAP5-7Q6L8G8 165 aa2.72□□□□□ -1.97
PCDH8-202ENST00000377942 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
PCDH8-202ENST00000377942 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms