RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 LCE2DQ5TA82 110 aaPredicted RBP5.91□□□□□ -1.46
CNTNAP3B-203ENST00000377561 HMCN2Q8NDA2 5059 aa5.91□□□□□ -1.46
CNTNAP3B-203ENST00000377561 LCE2AQ5TA79 106 aaPredicted RBP5.89□□□□□ -1.47
CNTNAP3B-203ENST00000377561 UBR4Q5T4S7 5183 aa5.83□□□□□ -1.48
CNTNAP3B-203ENST00000377561 KRTAP19-7Q3SYF9 63 aa5.82□□□□□ -1.48
CNTNAP3B-203ENST00000377561 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
CNTNAP3B-203ENST00000377561 MT3P25713 68 aa5.76□□□□□ -1.49
CNTNAP3B-203ENST00000377561 KRTAP4-3Q9BYR4 195 aa5.74□□□□□ -1.49
CNTNAP3B-203ENST00000377561 MT4P47944 62 aa5.7□□□□□ -1.5
CNTNAP3B-203ENST00000377561 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
CNTNAP3B-203ENST00000377561 KRTAP9-2Q9BYQ4 174 aa5.61□□□□□ -1.51
CNTNAP3B-203ENST00000377561 PRM1P04553 51 aa5.59□□□□□ -1.52
CNTNAP3B-203ENST00000377561 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
CNTNAP3B-203ENST00000377561 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
CNTNAP3B-203ENST00000377561 KRTAP2-1Q9BYU5 128 aa5.58□□□□□ -1.52
CNTNAP3B-203ENST00000377561 FSIP2Q5CZC0 6907 aa5.57□□□□□ -1.52
CNTNAP3B-203ENST00000377561 LCE1BQ5T7P3 118 aa5.55□□□□□ -1.52
CNTNAP3B-203ENST00000377561 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
CNTNAP3B-203ENST00000377561 MUC2Q02817 5179 aa5.5□□□□□ -1.53
CNTNAP3B-203ENST00000377561 MT1AP04731 61 aa5.49□□□□□ -1.53
CNTNAP3B-203ENST00000377561 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
CNTNAP3B-203ENST00000377561 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
CNTNAP3B-203ENST00000377561 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
CNTNAP3B-203ENST00000377561 KRTAP9-6A0A140TA67 174 aa5.25□□□□□ -1.57
CNTNAP3B-203ENST00000377561 LCE1AQ5T7P2 110 aa5.24□□□□□ -1.57
CNTNAP3B-203ENST00000377561 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
CNTNAP3B-203ENST00000377561 KRTAP20-1Q3LI63 56 aa5.14□□□□□ -1.59
CNTNAP3B-203ENST00000377561 SYNE2Q8WXH0 6885 aaKnown RBP5.12□□□□□ -1.59
CNTNAP3B-203ENST00000377561 KRTAP6-3Q3LI67 103 aa5.1□□□□□ -1.59
CNTNAP3B-203ENST00000377561 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
CNTNAP3B-203ENST00000377561 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
CNTNAP3B-203ENST00000377561 USH2AO75445 5202 aa5.04□□□□□ -1.6
CNTNAP3B-203ENST00000377561 KRTAP6-2Q3LI66 62 aa5.02□□□□□ -1.61
CNTNAP3B-203ENST00000377561 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
CNTNAP3B-203ENST00000377561 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.91□□□□□ -1.62
CNTNAP3B-203ENST00000377561 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
CNTNAP3B-203ENST00000377561 FCGBPQ9Y6R7 5405 aaPredicted RBP4.88□□□□□ -1.63
CNTNAP3B-203ENST00000377561 KMT2DO14686 5537 aa4.83□□□□□ -1.64
CNTNAP3B-203ENST00000377561 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
CNTNAP3B-203ENST00000377561 LCE1EQ5T753 118 aa4.79□□□□□ -1.64
CNTNAP3B-203ENST00000377561 LCE1FQ5T754 118 aa4.79□□□□□ -1.64
CNTNAP3B-203ENST00000377561 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.65
CNTNAP3B-203ENST00000377561 DSTQ03001 7570 aaKnown RBP4.69□□□□□ -1.66
CNTNAP3B-203ENST00000377561 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
CNTNAP3B-203ENST00000377561 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
CNTNAP3B-203ENST00000377561 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
CNTNAP3B-203ENST00000377561 MUC12Q9UKN1 5478 aa4.49□□□□□ -1.69
CNTNAP3B-203ENST00000377561 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
CNTNAP3B-203ENST00000377561 NEBP20929 6669 aa4.27□□□□□ -1.73
CNTNAP3B-203ENST00000377561 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
CNTNAP3B-203ENST00000377561 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
CNTNAP3B-203ENST00000377561 MUC19Q7Z5P9 8384 aa4.2□□□□□ -1.74
CNTNAP3B-203ENST00000377561 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
CNTNAP3B-203ENST00000377561 MDN1Q9NU22 5596 aa4.07□□□□□ -1.76
CNTNAP3B-203ENST00000377561 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
CNTNAP3B-203ENST00000377561 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
CNTNAP3B-203ENST00000377561 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
CNTNAP3B-203ENST00000377561 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
CNTNAP3B-203ENST00000377561 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
CNTNAP3B-203ENST00000377561 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
CNTNAP3B-203ENST00000377561 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
CNTNAP3B-203ENST00000377561 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
CNTNAP3B-203ENST00000377561 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
CNTNAP3B-203ENST00000377561 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
CNTNAP3B-203ENST00000377561 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
CNTNAP3B-203ENST00000377561 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
CNTNAP3B-203ENST00000377561 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
CNTNAP3B-203ENST00000377561 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
CNTNAP3B-203ENST00000377561 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
CNTNAP3B-203ENST00000377561 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
CNTNAP3B-203ENST00000377561 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
CNTNAP3B-203ENST00000377561 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
CNTNAP3B-203ENST00000377561 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
CNTNAP3B-203ENST00000377561 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
CNTNAP3B-203ENST00000377561 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
CNTNAP3B-203ENST00000377561 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
CNTNAP3B-203ENST00000377561 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 7.5 ms