RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 KRTAP19-6Q3LI70 58 aa4.65□□□□□ -1.67
SF1-205ENST00000377394 FCGBPQ9Y6R7 5405 aaPredicted RBP4.5□□□□□ -1.69
SF1-205ENST00000377394 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
SF1-205ENST00000377394 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
SF1-205ENST00000377394 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
SF1-205ENST00000377394 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
SF1-205ENST00000377394 MT1MQ8N339 61 aa4.44□□□□□ -1.7
SF1-205ENST00000377394 MT1GP13640 62 aa4.43□□□□□ -1.7
SF1-205ENST00000377394 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
SF1-205ENST00000377394 CRCT1Q9UGL9 99 aa4.31□□□□□ -1.72
SF1-205ENST00000377394 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
SF1-205ENST00000377394 LCE5AQ5TCM9 118 aa4.28□□□□□ -1.72
SF1-205ENST00000377394 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
SF1-205ENST00000377394 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
SF1-205ENST00000377394 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
SF1-205ENST00000377394 KRTAP9-2Q9BYQ4 174 aa4.22□□□□□ -1.73
SF1-205ENST00000377394 MACF1Q9UPN3 7388 aaKnown RBP4.21□□□□□ -1.73
SF1-205ENST00000377394 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
SF1-205ENST00000377394 SYNE2Q8WXH0 6885 aaKnown RBP4.17□□□□□ -1.74
SF1-205ENST00000377394 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
SF1-205ENST00000377394 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
SF1-205ENST00000377394 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
SF1-205ENST00000377394 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
SF1-205ENST00000377394 MDN1Q9NU22 5596 aa4.04□□□□□ -1.76
SF1-205ENST00000377394 PRM1P04553 51 aa4.02□□□□□ -1.77
SF1-205ENST00000377394 MT1AP04731 61 aa4.01□□□□□ -1.77
SF1-205ENST00000377394 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
SF1-205ENST00000377394 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.77
SF1-205ENST00000377394 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
SF1-205ENST00000377394 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
SF1-205ENST00000377394 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
SF1-205ENST00000377394 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
SF1-205ENST00000377394 SPRR2EP22531 72 aa3.83□□□□□ -1.8
SF1-205ENST00000377394 SPRR2BP35325 72 aa3.83□□□□□ -1.8
SF1-205ENST00000377394 SPRR2AP35326 72 aa3.83□□□□□ -1.8
SF1-205ENST00000377394 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
SF1-205ENST00000377394 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
SF1-205ENST00000377394 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
SF1-205ENST00000377394 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.67□□□□□ -1.82
SF1-205ENST00000377394 SPRR2DP22532 72 aa3.66□□□□□ -1.82
SF1-205ENST00000377394 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
SF1-205ENST00000377394 MT3P25713 68 aa3.57□□□□□ -1.84
SF1-205ENST00000377394 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
SF1-205ENST00000377394 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
SF1-205ENST00000377394 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.86
SF1-205ENST00000377394 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
SF1-205ENST00000377394 NEBP20929 6669 aa3.33□□□□□ -1.88
SF1-205ENST00000377394 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
SF1-205ENST00000377394 LCE1DQ5T752 114 aa3.31□□□□□ -1.88
SF1-205ENST00000377394 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
SF1-205ENST00000377394 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
SF1-205ENST00000377394 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
SF1-205ENST00000377394 MT4P47944 62 aa3.22□□□□□ -1.89
SF1-205ENST00000377394 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
SF1-205ENST00000377394 LCE4AQ5TA78 99 aa3.18□□□□□ -1.9
SF1-205ENST00000377394 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
SF1-205ENST00000377394 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
SF1-205ENST00000377394 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
SF1-205ENST00000377394 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
SF1-205ENST00000377394 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
SF1-205ENST00000377394 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
SF1-205ENST00000377394 KRTAP5-10Q6L8G5 202 aa2.86□□□□□ -1.95
SF1-205ENST00000377394 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
SF1-205ENST00000377394 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
SF1-205ENST00000377394 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
SF1-205ENST00000377394 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
SF1-205ENST00000377394 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
SF1-205ENST00000377394 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
SF1-205ENST00000377394 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -2
SF1-205ENST00000377394 KRTAP5-8O75690 187 aa2.53□□□□□ -2
SF1-205ENST00000377394 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
SF1-205ENST00000377394 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
SF1-205ENST00000377394 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
SF1-205ENST00000377394 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
SF1-205ENST00000377394 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
SF1-205ENST00000377394 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
SF1-205ENST00000377394 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 1359.6 ms