RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 NEBP20929 6669 aa7.79□□□□□ -1.16
CBWD3-202ENST00000377342 KRTAP12-3P60328 96 aa7.76□□□□□ -1.17
CBWD3-202ENST00000377342 LCE1AQ5T7P2 110 aa7.76□□□□□ -1.17
CBWD3-202ENST00000377342 PP632Q6XCG6 107 aa7.75□□□□□ -1.17
CBWD3-202ENST00000377342 SPRR2EP22531 72 aa7.74□□□□□ -1.17
CBWD3-202ENST00000377342 SPRR2BP35325 72 aa7.74□□□□□ -1.17
CBWD3-202ENST00000377342 SPRR2AP35326 72 aa7.74□□□□□ -1.17
CBWD3-202ENST00000377342 KRTAP4-7Q9BYR0 210 aa7.68□□□□□ -1.18
CBWD3-202ENST00000377342 KRTAP19-3Q7Z4W3 81 aa7.63□□□□□ -1.19
CBWD3-202ENST00000377342 MT1LQ93083 61 aa7.63□□□□□ -1.19
CBWD3-202ENST00000377342 LCE5AQ5TCM9 118 aa7.57□□□□□ -1.2
CBWD3-202ENST00000377342 PRAC1Q96KF2 57 aa7.56□□□□□ -1.2
CBWD3-202ENST00000377342 LCE1DQ5T752 114 aa7.52□□□□□ -1.21
CBWD3-202ENST00000377342 MT1GP13640 62 aa7.5□□□□□ -1.21
CBWD3-202ENST00000377342 KTN1-AS1Q86SY8 53 aa7.48□□□□□ -1.21
CBWD3-202ENST00000377342 KRTAP15-1Q3LI76 137 aa7.47□□□□□ -1.21
CBWD3-202ENST00000377342 SPRR2DP22532 72 aa7.47□□□□□ -1.21
CBWD3-202ENST00000377342 MT1MQ8N339 61 aa7.44□□□□□ -1.22
CBWD3-202ENST00000377342 KRTAP4-9Q9BYQ8 210 aa7.36□□□□□ -1.23
CBWD3-202ENST00000377342 KRTAP4-2Q9BYR5 136 aa7.34□□□□□ -1.23
CBWD3-202ENST00000377342 KRTAP4-3Q9BYR4 195 aa7.28□□□□□ -1.24
CBWD3-202ENST00000377342 KRTAP19-4Q3LI73 84 aa7.26□□□□□ -1.25
CBWD3-202ENST00000377342 KRTAP20-1Q3LI63 56 aa7.25□□□□□ -1.25
CBWD3-202ENST00000377342 DSTQ03001 7570 aaKnown RBP7.24□□□□□ -1.25
CBWD3-202ENST00000377342 KRTAP2-3P0C7H8 128 aa7.22□□□□□ -1.25
CBWD3-202ENST00000377342 LCE3CQ5T5A8 94 aa7.22□□□□□ -1.25
CBWD3-202ENST00000377342 KRTAP2-4Q9BYR9 128 aa7.22□□□□□ -1.25
CBWD3-202ENST00000377342 SVIPQ8NHG7 77 aa7.06□□□□□ -1.28
CBWD3-202ENST00000377342 KRTAP2-2Q9BYT5 123 aa7.03□□□□□ -1.28
CBWD3-202ENST00000377342 KRTAP2-1Q9BYU5 128 aa7.03□□□□□ -1.28
CBWD3-202ENST00000377342 KRTAP4-11Q9BYQ6 195 aa7□□□□□ -1.29
CBWD3-202ENST00000377342 KRTAP5-3Q6L8H2 238 aa7□□□□□ -1.29
CBWD3-202ENST00000377342 KRTAP9-6A8MVA2 160 aa6.88□□□□□ -1.31
CBWD3-202ENST00000377342 KRTAP5-5Q701N2 237 aaPredicted RBP6.78□□□□□ -1.32
CBWD3-202ENST00000377342 SPRR5A0A1B0GTR4 108 aa6.74□□□□□ -1.33
CBWD3-202ENST00000377342 KRTAP5-4Q6L8H1 288 aa6.69□□□□□ -1.34
CBWD3-202ENST00000377342 LCE4AQ5TA78 99 aa6.62□□□□□ -1.35
CBWD3-202ENST00000377342 MT4P47944 62 aa6.49□□□□□ -1.37
CBWD3-202ENST00000377342 MT1AP04731 61 aa6.49□□□□□ -1.37
CBWD3-202ENST00000377342 SYNE1Q8NF91 8797 aaKnown RBP6.46□□□□□ -1.37
CBWD3-202ENST00000377342 KRTAP6-1Q3LI64 71 aa6.43□□□□□ -1.38
CBWD3-202ENST00000377342 HMCN1Q96RW7 5635 aa6.39□□□□□ -1.39
CBWD3-202ENST00000377342 KRTAP12-4P60329 112 aa6.32□□□□□ -1.4
CBWD3-202ENST00000377342 KRTAP20-2Q3LI61 65 aa6.26□□□□□ -1.41
CBWD3-202ENST00000377342 LUZP6Q538Z0 58 aa6.14□□□□□ -1.43
CBWD3-202ENST00000377342 KRTAP6-2Q3LI66 62 aa6□□□□□ -1.45
CBWD3-202ENST00000377342 KRTAP5-2Q701N4 177 aa6□□□□□ -1.45
CBWD3-202ENST00000377342 AHNAK2Q8IVF2 5795 aa5.9□□□□□ -1.47
CBWD3-202ENST00000377342 MT3P25713 68 aa5.85□□□□□ -1.47
CBWD3-202ENST00000377342 GPR98Q8WXG9 6306 aa5.73□□□□□ -1.49
CBWD3-202ENST00000377342 NDUFAF8A1L188 74 aa5.7□□□□□ -1.5
CBWD3-202ENST00000377342 KRTAP5-10Q6L8G5 202 aa5.68□□□□□ -1.5
CBWD3-202ENST00000377342 OBSCNQ5VST9 7968 aa5.56□□□□□ -1.52
CBWD3-202ENST00000377342 KRTAP5-8O75690 187 aa5.36□□□□□ -1.55
CBWD3-202ENST00000377342 KRTAP5-7Q6L8G8 165 aa5.34□□□□□ -1.56
CBWD3-202ENST00000377342 LCE3DQ9BYE3 92 aa5.32□□□□□ -1.56
CBWD3-202ENST00000377342 H3BS24 57 aa5.25□□□□□ -1.57
CBWD3-202ENST00000377342 KRTAP5-1Q6L8H4 278 aa5.24□□□□□ -1.57
CBWD3-202ENST00000377342 LCE1EQ5T753 118 aa5.22□□□□□ -1.57
CBWD3-202ENST00000377342 LCE3EQ5T5B0 92 aa5.12□□□□□ -1.59
CBWD3-202ENST00000377342 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.09□□□□□ -1.59
CBWD3-202ENST00000377342 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
CBWD3-202ENST00000377342 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
CBWD3-202ENST00000377342 LCE1CQ5T751 118 aa4.86□□□□□ -1.63
CBWD3-202ENST00000377342 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
CBWD3-202ENST00000377342 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
CBWD3-202ENST00000377342 KRTAP5-11Q6L8G4 156 aa4.68□□□□□ -1.66
CBWD3-202ENST00000377342 INE1O15225 51 aa4.64□□□□□ -1.67
CBWD3-202ENST00000377342 AHNAKQ09666 5890 aaKnown RBP4.61□□□□□ -1.67
CBWD3-202ENST00000377342 PRM1P04553 51 aa4.26□□□□□ -1.73
CBWD3-202ENST00000377342 KRTAP21-2Q3LI59 83 aa4.24□□□□□ -1.73
CBWD3-202ENST00000377342 KRTAP4-4Q9BYR3 166 aa4.22□□□□□ -1.73
CBWD3-202ENST00000377342 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
CBWD3-202ENST00000377342 PHGR1C9JFL3 82 aa3.75□□□□□ -1.81
CBWD3-202ENST00000377342 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
CBWD3-202ENST00000377342 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
CBWD3-202ENST00000377342 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 7.1 ms