RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
USP11-203ENST00000377080 MDN1Q9NU22 5596 aa3.9□□□□□ -1.78
USP11-203ENST00000377080 GPR98Q8WXG9 6306 aa3.88□□□□□ -1.79
USP11-203ENST00000377080 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
USP11-203ENST00000377080 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.79
USP11-203ENST00000377080 INE1O15225 51 aa3.82□□□□□ -1.8
USP11-203ENST00000377080 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
USP11-203ENST00000377080 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
USP11-203ENST00000377080 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
USP11-203ENST00000377080 SPRR2EP22531 72 aa3.74□□□□□ -1.81
USP11-203ENST00000377080 SPRR2BP35325 72 aa3.74□□□□□ -1.81
USP11-203ENST00000377080 SPRR2AP35326 72 aa3.74□□□□□ -1.81
USP11-203ENST00000377080 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
USP11-203ENST00000377080 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
USP11-203ENST00000377080 SPRR2FQ96RM1 72 aa3.68□□□□□ -1.82
USP11-203ENST00000377080 SPRR2DP22532 72 aa3.62□□□□□ -1.83
USP11-203ENST00000377080 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
USP11-203ENST00000377080 DSTQ03001 7570 aaKnown RBP3.58□□□□□ -1.84
USP11-203ENST00000377080 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
USP11-203ENST00000377080 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
USP11-203ENST00000377080 KRTAP4-8A0A0G2JLE6 195 aa3.53□□□□□ -1.84
USP11-203ENST00000377080 KRTAP4-8Q9BYQ9 185 aa3.53□□□□□ -1.84
USP11-203ENST00000377080 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
USP11-203ENST00000377080 MT1EP04732 61 aa3.48□□□□□ -1.85
USP11-203ENST00000377080 MT1LQ93083 61 aa3.47□□□□□ -1.85
USP11-203ENST00000377080 KRTAP4-9Q9BYQ8 210 aa3.45□□□□□ -1.86
USP11-203ENST00000377080 KRTAP4-7Q9BYR0 210 aa3.34□□□□□ -1.87
USP11-203ENST00000377080 MT1GP13640 62 aa3.32□□□□□ -1.88
USP11-203ENST00000377080 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
USP11-203ENST00000377080 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
USP11-203ENST00000377080 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
USP11-203ENST00000377080 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
USP11-203ENST00000377080 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
USP11-203ENST00000377080 MT1MQ8N339 61 aa3.24□□□□□ -1.89
USP11-203ENST00000377080 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
USP11-203ENST00000377080 MT4P47944 62 aa3.21□□□□□ -1.9
USP11-203ENST00000377080 LCE5AQ5TCM9 118 aa3.17□□□□□ -1.9
USP11-203ENST00000377080 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
USP11-203ENST00000377080 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
USP11-203ENST00000377080 LOC100996750A0A140TA64 210 aa3.11□□□□□ -1.91
USP11-203ENST00000377080 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
USP11-203ENST00000377080 MT1AP04731 61 aa3.07□□□□□ -1.92
USP11-203ENST00000377080 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
USP11-203ENST00000377080 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
USP11-203ENST00000377080 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
USP11-203ENST00000377080 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
USP11-203ENST00000377080 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
USP11-203ENST00000377080 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
USP11-203ENST00000377080 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
USP11-203ENST00000377080 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
USP11-203ENST00000377080 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
USP11-203ENST00000377080 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
USP11-203ENST00000377080 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
USP11-203ENST00000377080 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
USP11-203ENST00000377080 KRTAP9-4Q9BYQ2 154 aa2.81□□□□□ -1.96
USP11-203ENST00000377080 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
USP11-203ENST00000377080 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
USP11-203ENST00000377080 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
USP11-203ENST00000377080 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
USP11-203ENST00000377080 MT3P25713 68 aa2.69□□□□□ -1.98
USP11-203ENST00000377080 PRM1P04553 51 aa2.63□□□□□ -1.99
USP11-203ENST00000377080 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
USP11-203ENST00000377080 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
USP11-203ENST00000377080 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
USP11-203ENST00000377080 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
USP11-203ENST00000377080 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
USP11-203ENST00000377080 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
USP11-203ENST00000377080 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
USP11-203ENST00000377080 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
USP11-203ENST00000377080 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
USP11-203ENST00000377080 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
USP11-203ENST00000377080 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
USP11-203ENST00000377080 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
USP11-203ENST00000377080 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
USP11-203ENST00000377080 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
USP11-203ENST00000377080 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
USP11-203ENST00000377080 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
USP11-203ENST00000377080 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 122.6 ms