RNA–Protein interactions for RNA: ENST00000377067.8

GPC5-201, Transcript of glypican 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC5, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-201ENST00000377067 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.42
GPC5-201ENST00000377067 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
GPC5-201ENST00000377067 MT1GP13640 62 aa6.09□□□□□ -1.43
GPC5-201ENST00000377067 CRCT1Q9UGL9 99 aa6.09□□□□□ -1.43
GPC5-201ENST00000377067 FCGBPQ9Y6R7 5405 aaPredicted RBP5.92□□□□□ -1.46
GPC5-201ENST00000377067 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
GPC5-201ENST00000377067 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
GPC5-201ENST00000377067 KRTAP19-6Q3LI70 58 aa5.85□□□□□ -1.47
GPC5-201ENST00000377067 KRTAP9-2Q9BYQ4 174 aa5.84□□□□□ -1.47
GPC5-201ENST00000377067 MUC12Q9UKN1 5478 aa5.84□□□□□ -1.47
GPC5-201ENST00000377067 MT1MQ8N339 61 aa5.82□□□□□ -1.48
GPC5-201ENST00000377067 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
GPC5-201ENST00000377067 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
GPC5-201ENST00000377067 SYNE1Q8NF91 8797 aaKnown RBP5.78□□□□□ -1.48
GPC5-201ENST00000377067 MACF1Q9UPN3 7388 aaKnown RBP5.76□□□□□ -1.49
GPC5-201ENST00000377067 SYNE2Q8WXH0 6885 aaKnown RBP5.72□□□□□ -1.49
GPC5-201ENST00000377067 KRTAP19-3Q7Z4W3 81 aa5.7□□□□□ -1.5
GPC5-201ENST00000377067 KRTAP9-7A8MTY7 169 aa5.66□□□□□ -1.5
GPC5-201ENST00000377067 PRM1P04553 51 aa5.61□□□□□ -1.51
GPC5-201ENST00000377067 KRTAP5-5Q701N2 237 aaPredicted RBP5.54□□□□□ -1.52
GPC5-201ENST00000377067 LCE3DQ9BYE3 92 aa5.53□□□□□ -1.52
GPC5-201ENST00000377067 MT1AP04731 61 aa5.51□□□□□ -1.53
GPC5-201ENST00000377067 LCE3EQ5T5B0 92 aa5.5□□□□□ -1.53
GPC5-201ENST00000377067 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.53
GPC5-201ENST00000377067 KRTAP6-1Q3LI64 71 aa5.46□□□□□ -1.54
GPC5-201ENST00000377067 MDN1Q9NU22 5596 aa5.42□□□□□ -1.54
GPC5-201ENST00000377067 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
GPC5-201ENST00000377067 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.55
GPC5-201ENST00000377067 KRTAP9-6A0A140TA67 174 aa5.35□□□□□ -1.55
GPC5-201ENST00000377067 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
GPC5-201ENST00000377067 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
GPC5-201ENST00000377067 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
GPC5-201ENST00000377067 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
GPC5-201ENST00000377067 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.18□□□□□ -1.58
GPC5-201ENST00000377067 SPRR2EP22531 72 aa5.1□□□□□ -1.59
GPC5-201ENST00000377067 SPRR2BP35325 72 aa5.1□□□□□ -1.59
GPC5-201ENST00000377067 SPRR2AP35326 72 aa5.1□□□□□ -1.59
GPC5-201ENST00000377067 KRTAP5-9P26371 169 aa5.07□□□□□ -1.6
GPC5-201ENST00000377067 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
GPC5-201ENST00000377067 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.62
GPC5-201ENST00000377067 SPRR2DP22532 72 aa4.89□□□□□ -1.63
GPC5-201ENST00000377067 NEBP20929 6669 aa4.76□□□□□ -1.65
GPC5-201ENST00000377067 LCE1DQ5T752 114 aa4.71□□□□□ -1.65
GPC5-201ENST00000377067 MT3P25713 68 aa4.69□□□□□ -1.66
GPC5-201ENST00000377067 MT4P47944 62 aa4.41□□□□□ -1.7
GPC5-201ENST00000377067 KRTAP4-6Q9BYQ5 205 aa4.31□□□□□ -1.72
GPC5-201ENST00000377067 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
GPC5-201ENST00000377067 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
GPC5-201ENST00000377067 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
GPC5-201ENST00000377067 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
GPC5-201ENST00000377067 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
GPC5-201ENST00000377067 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
GPC5-201ENST00000377067 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
GPC5-201ENST00000377067 LCE1FQ5T754 118 aa4□□□□□ -1.77
GPC5-201ENST00000377067 KRTAP5-10Q6L8G5 202 aa3.96□□□□□ -1.78
GPC5-201ENST00000377067 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
GPC5-201ENST00000377067 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
GPC5-201ENST00000377067 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
GPC5-201ENST00000377067 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
GPC5-201ENST00000377067 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.82
GPC5-201ENST00000377067 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
GPC5-201ENST00000377067 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
GPC5-201ENST00000377067 KRTAP21-1Q3LI58 79 aa3.49□□□□□ -1.85
GPC5-201ENST00000377067 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
GPC5-201ENST00000377067 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
GPC5-201ENST00000377067 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
GPC5-201ENST00000377067 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
GPC5-201ENST00000377067 GPR98Q8WXG9 6306 aa3.26□□□□□ -1.89
GPC5-201ENST00000377067 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
GPC5-201ENST00000377067 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
GPC5-201ENST00000377067 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
GPC5-201ENST00000377067 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
GPC5-201ENST00000377067 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
GPC5-201ENST00000377067 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
GPC5-201ENST00000377067 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
GPC5-201ENST00000377067 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
GPC5-201ENST00000377067 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 168.8 ms