RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 KRTAP12-4P60329 112 aa7.1□□□□□ -1.27
SYNDIG1-201ENST00000376862 KRTAP19-6Q3LI70 58 aa7.09□□□□□ -1.27
SYNDIG1-201ENST00000376862 KRTAP4-3Q9BYR4 195 aa7.05□□□□□ -1.28
SYNDIG1-201ENST00000376862 MT1GP13640 62 aa7□□□□□ -1.29
SYNDIG1-201ENST00000376862 FCGBPQ9Y6R7 5405 aaPredicted RBP6.99□□□□□ -1.29
SYNDIG1-201ENST00000376862 MUC12Q9UKN1 5478 aa6.93□□□□□ -1.3
SYNDIG1-201ENST00000376862 CRCT1Q9UGL9 99 aa6.9□□□□□ -1.31
SYNDIG1-201ENST00000376862 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
SYNDIG1-201ENST00000376862 MT1MQ8N339 61 aa6.75□□□□□ -1.33
SYNDIG1-201ENST00000376862 DSTQ03001 7570 aaKnown RBP6.69□□□□□ -1.34
SYNDIG1-201ENST00000376862 MACF1Q9UPN3 7388 aaKnown RBP6.66□□□□□ -1.34
SYNDIG1-201ENST00000376862 KRTAP4-9Q9BYQ8 210 aa6.65□□□□□ -1.34
SYNDIG1-201ENST00000376862 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
SYNDIG1-201ENST00000376862 KRTAP19-3Q7Z4W3 81 aa6.64□□□□□ -1.35
SYNDIG1-201ENST00000376862 SPRR2FQ96RM1 72 aa6.53□□□□□ -1.36
SYNDIG1-201ENST00000376862 SYNE2Q8WXH0 6885 aaKnown RBP6.53□□□□□ -1.36
SYNDIG1-201ENST00000376862 KRTAP9-2Q9BYQ4 174 aa6.52□□□□□ -1.37
SYNDIG1-201ENST00000376862 SYNE1Q8NF91 8797 aaKnown RBP6.48□□□□□ -1.37
SYNDIG1-201ENST00000376862 KRTAP9-7A8MTY7 169 aa6.43□□□□□ -1.38
SYNDIG1-201ENST00000376862 MT1AP04731 61 aa6.43□□□□□ -1.38
SYNDIG1-201ENST00000376862 MDN1Q9NU22 5596 aa6.41□□□□□ -1.38
SYNDIG1-201ENST00000376862 LCE5AQ5TCM9 118 aa6.39□□□□□ -1.39
SYNDIG1-201ENST00000376862 PRM1P04553 51 aa6.38□□□□□ -1.39
SYNDIG1-201ENST00000376862 KRTAP5-5Q701N2 237 aaPredicted RBP6.37□□□□□ -1.39
SYNDIG1-201ENST00000376862 LCE3DQ9BYE3 92 aa6.36□□□□□ -1.39
SYNDIG1-201ENST00000376862 KRTAP9-6A0A140TA67 174 aa6.33□□□□□ -1.4
SYNDIG1-201ENST00000376862 LCE3EQ5T5B0 92 aa6.32□□□□□ -1.4
SYNDIG1-201ENST00000376862 KRTAP6-1Q3LI64 71 aa6.3□□□□□ -1.4
SYNDIG1-201ENST00000376862 LCE1AQ5T7P2 110 aa6.09□□□□□ -1.43
SYNDIG1-201ENST00000376862 KRTAP5-9P26371 169 aa6.07□□□□□ -1.44
SYNDIG1-201ENST00000376862 KRTAP6-2Q3LI66 62 aa6□□□□□ -1.45
SYNDIG1-201ENST00000376862 SPRR2EP22531 72 aa5.99□□□□□ -1.45
SYNDIG1-201ENST00000376862 SPRR2BP35325 72 aa5.99□□□□□ -1.45
SYNDIG1-201ENST00000376862 SPRR2AP35326 72 aa5.99□□□□□ -1.45
SYNDIG1-201ENST00000376862 KRTAP6-3Q3LI67 103 aa5.94□□□□□ -1.46
SYNDIG1-201ENST00000376862 SPRR2DP22532 72 aa5.74□□□□□ -1.49
SYNDIG1-201ENST00000376862 KRTAP9-4Q9BYQ2 154 aa5.73□□□□□ -1.49
SYNDIG1-201ENST00000376862 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.72□□□□□ -1.49
SYNDIG1-201ENST00000376862 OBSCNQ5VST9 7968 aa5.71□□□□□ -1.5
SYNDIG1-201ENST00000376862 KRTAP2-2Q9BYT5 123 aa5.67□□□□□ -1.5
SYNDIG1-201ENST00000376862 MT3P25713 68 aa5.45□□□□□ -1.54
SYNDIG1-201ENST00000376862 NEBP20929 6669 aa5.31□□□□□ -1.56
SYNDIG1-201ENST00000376862 KRTAP5-4Q6L8H1 288 aa5.2□□□□□ -1.58
SYNDIG1-201ENST00000376862 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
SYNDIG1-201ENST00000376862 KRTAP4-6Q9BYQ5 205 aa5.1□□□□□ -1.59
SYNDIG1-201ENST00000376862 MT4P47944 62 aa5.09□□□□□ -1.59
SYNDIG1-201ENST00000376862 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
SYNDIG1-201ENST00000376862 KRTAP20-1Q3LI63 56 aa4.96□□□□□ -1.62
SYNDIG1-201ENST00000376862 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
SYNDIG1-201ENST00000376862 KRTAP20-2Q3LI61 65 aa4.92□□□□□ -1.62
SYNDIG1-201ENST00000376862 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
SYNDIG1-201ENST00000376862 KRTAP5-2Q701N4 177 aa4.82□□□□□ -1.64
SYNDIG1-201ENST00000376862 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
SYNDIG1-201ENST00000376862 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
SYNDIG1-201ENST00000376862 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
SYNDIG1-201ENST00000376862 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
SYNDIG1-201ENST00000376862 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
SYNDIG1-201ENST00000376862 KRTAP5-1Q6L8H4 278 aa4.39□□□□□ -1.71
SYNDIG1-201ENST00000376862 GPR98Q8WXG9 6306 aa4.27□□□□□ -1.73
SYNDIG1-201ENST00000376862 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
SYNDIG1-201ENST00000376862 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
SYNDIG1-201ENST00000376862 KRTAP21-1Q3LI58 79 aa4.03□□□□□ -1.76
SYNDIG1-201ENST00000376862 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
SYNDIG1-201ENST00000376862 AHNAK2Q8IVF2 5795 aa3.98□□□□□ -1.77
SYNDIG1-201ENST00000376862 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
SYNDIG1-201ENST00000376862 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
SYNDIG1-201ENST00000376862 MUC19Q7Z5P9 8384 aa3.84□□□□□ -1.79
SYNDIG1-201ENST00000376862 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
SYNDIG1-201ENST00000376862 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
SYNDIG1-201ENST00000376862 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
SYNDIG1-201ENST00000376862 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
SYNDIG1-201ENST00000376862 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
SYNDIG1-201ENST00000376862 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
SYNDIG1-201ENST00000376862 KRTAP9-9Q9BYP9 154 aa3.39□□□□□ -1.87
SYNDIG1-201ENST00000376862 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
SYNDIG1-201ENST00000376862 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
SYNDIG1-201ENST00000376862 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms