RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 MT1GP13640 62 aa5.3□□□□□ -1.56
TRIM39-201ENST00000376656 KRTAP12-4P60329 112 aa5.23□□□□□ -1.57
TRIM39-201ENST00000376656 CRCT1Q9UGL9 99 aa5.22□□□□□ -1.57
TRIM39-201ENST00000376656 LCE2DQ5TA82 110 aaPredicted RBP5.18□□□□□ -1.58
TRIM39-201ENST00000376656 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
TRIM39-201ENST00000376656 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
TRIM39-201ENST00000376656 MT1MQ8N339 61 aa5.16□□□□□ -1.58
TRIM39-201ENST00000376656 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
TRIM39-201ENST00000376656 FSIP2Q5CZC0 6907 aa5.11□□□□□ -1.59
TRIM39-201ENST00000376656 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
TRIM39-201ENST00000376656 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
TRIM39-201ENST00000376656 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
TRIM39-201ENST00000376656 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
TRIM39-201ENST00000376656 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
TRIM39-201ENST00000376656 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
TRIM39-201ENST00000376656 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
TRIM39-201ENST00000376656 MT1AP04731 61 aa4.81□□□□□ -1.64
TRIM39-201ENST00000376656 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
TRIM39-201ENST00000376656 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
TRIM39-201ENST00000376656 LCE3DQ9BYE3 92 aa4.74□□□□□ -1.65
TRIM39-201ENST00000376656 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
TRIM39-201ENST00000376656 KRTAP5-5Q701N2 237 aaPredicted RBP4.71□□□□□ -1.66
TRIM39-201ENST00000376656 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
TRIM39-201ENST00000376656 PRM1P04553 51 aa4.68□□□□□ -1.66
TRIM39-201ENST00000376656 LCE1AQ5T7P2 110 aa4.61□□□□□ -1.67
TRIM39-201ENST00000376656 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
TRIM39-201ENST00000376656 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
TRIM39-201ENST00000376656 MDN1Q9NU22 5596 aa4.52□□□□□ -1.69
TRIM39-201ENST00000376656 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
TRIM39-201ENST00000376656 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
TRIM39-201ENST00000376656 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
TRIM39-201ENST00000376656 KRTAP6-2Q3LI66 62 aa4.45□□□□□ -1.7
TRIM39-201ENST00000376656 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
TRIM39-201ENST00000376656 KRTAP9-6A0A140TA67 174 aa4.37□□□□□ -1.71
TRIM39-201ENST00000376656 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
TRIM39-201ENST00000376656 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
TRIM39-201ENST00000376656 SPRR2EP22531 72 aa4.24□□□□□ -1.73
TRIM39-201ENST00000376656 SPRR2BP35325 72 aa4.24□□□□□ -1.73
TRIM39-201ENST00000376656 SPRR2AP35326 72 aa4.24□□□□□ -1.73
TRIM39-201ENST00000376656 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
TRIM39-201ENST00000376656 MT3P25713 68 aa4.16□□□□□ -1.74
TRIM39-201ENST00000376656 SPRR2DP22532 72 aa4.03□□□□□ -1.76
TRIM39-201ENST00000376656 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
TRIM39-201ENST00000376656 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
TRIM39-201ENST00000376656 KRTAP5-4Q6L8H1 288 aa3.77□□□□□ -1.81
TRIM39-201ENST00000376656 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
TRIM39-201ENST00000376656 MUC5ACP98088 5654 aa3.65□□□□□ -1.83
TRIM39-201ENST00000376656 MT4P47944 62 aa3.62□□□□□ -1.83
TRIM39-201ENST00000376656 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.83
TRIM39-201ENST00000376656 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
TRIM39-201ENST00000376656 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
TRIM39-201ENST00000376656 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
TRIM39-201ENST00000376656 NEBP20929 6669 aa3.44□□□□□ -1.86
TRIM39-201ENST00000376656 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
TRIM39-201ENST00000376656 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
TRIM39-201ENST00000376656 LCE4AQ5TA78 99 aa3.4□□□□□ -1.86
TRIM39-201ENST00000376656 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
TRIM39-201ENST00000376656 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
TRIM39-201ENST00000376656 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
TRIM39-201ENST00000376656 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
TRIM39-201ENST00000376656 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
TRIM39-201ENST00000376656 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
TRIM39-201ENST00000376656 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
TRIM39-201ENST00000376656 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
TRIM39-201ENST00000376656 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
TRIM39-201ENST00000376656 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.95
TRIM39-201ENST00000376656 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
TRIM39-201ENST00000376656 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
TRIM39-201ENST00000376656 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
TRIM39-201ENST00000376656 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
TRIM39-201ENST00000376656 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
TRIM39-201ENST00000376656 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
TRIM39-201ENST00000376656 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
TRIM39-201ENST00000376656 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
TRIM39-201ENST00000376656 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
TRIM39-201ENST00000376656 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
TRIM39-201ENST00000376656 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 97.3 ms