RNA–Protein interactions for RNA: ENST00000376048.9

PRDM2-204, Transcript of PR/SET domain 2, humanhuman

TSL 2 BASIC

Gene PRDM2, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-204ENST00000376048 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
PRDM2-204ENST00000376048 KRTAP10-12P60413 245 aa4.61□□□□□ -1.67
PRDM2-204ENST00000376048 CRCT1Q9UGL9 99 aa4.56□□□□□ -1.68
PRDM2-204ENST00000376048 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
PRDM2-204ENST00000376048 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
PRDM2-204ENST00000376048 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
PRDM2-204ENST00000376048 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
PRDM2-204ENST00000376048 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
PRDM2-204ENST00000376048 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
PRDM2-204ENST00000376048 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
PRDM2-204ENST00000376048 MT3P25713 68 aa4.31□□□□□ -1.72
PRDM2-204ENST00000376048 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
PRDM2-204ENST00000376048 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
PRDM2-204ENST00000376048 MUC12Q9UKN1 5478 aa4.24□□□□□ -1.73
PRDM2-204ENST00000376048 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
PRDM2-204ENST00000376048 KRTAP4-9Q9BYQ8 210 aa4.24□□□□□ -1.73
PRDM2-204ENST00000376048 KRTAP19-7Q3SYF9 63 aa4.19□□□□□ -1.74
PRDM2-204ENST00000376048 DSTQ03001 7570 aaKnown RBP4.14□□□□□ -1.75
PRDM2-204ENST00000376048 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
PRDM2-204ENST00000376048 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
PRDM2-204ENST00000376048 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
PRDM2-204ENST00000376048 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
PRDM2-204ENST00000376048 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
PRDM2-204ENST00000376048 MT1EP04732 61 aa4.05□□□□□ -1.76
PRDM2-204ENST00000376048 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
PRDM2-204ENST00000376048 MT1LQ93083 61 aa4.04□□□□□ -1.76
PRDM2-204ENST00000376048 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
PRDM2-204ENST00000376048 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
PRDM2-204ENST00000376048 KRTAP20-1Q3LI63 56 aa3.98□□□□□ -1.77
PRDM2-204ENST00000376048 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
PRDM2-204ENST00000376048 SYNE2Q8WXH0 6885 aaKnown RBP3.96□□□□□ -1.78
PRDM2-204ENST00000376048 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
PRDM2-204ENST00000376048 MDN1Q9NU22 5596 aa3.9□□□□□ -1.79
PRDM2-204ENST00000376048 MT1GP13640 62 aa3.87□□□□□ -1.79
PRDM2-204ENST00000376048 NEBP20929 6669 aa3.86□□□□□ -1.79
PRDM2-204ENST00000376048 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
PRDM2-204ENST00000376048 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
PRDM2-204ENST00000376048 MT1MQ8N339 61 aa3.79□□□□□ -1.8
PRDM2-204ENST00000376048 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.8
PRDM2-204ENST00000376048 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
PRDM2-204ENST00000376048 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
PRDM2-204ENST00000376048 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
PRDM2-204ENST00000376048 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
PRDM2-204ENST00000376048 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
PRDM2-204ENST00000376048 SPRR2EP22531 72 aa3.52□□□□□ -1.85
PRDM2-204ENST00000376048 SPRR2BP35325 72 aa3.52□□□□□ -1.85
PRDM2-204ENST00000376048 SPRR2AP35326 72 aa3.52□□□□□ -1.85
PRDM2-204ENST00000376048 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
PRDM2-204ENST00000376048 KRTAP5-3Q6L8H2 238 aa3.44□□□□□ -1.86
PRDM2-204ENST00000376048 SPRR2DP22532 72 aa3.39□□□□□ -1.87
PRDM2-204ENST00000376048 MT1AP04731 61 aa3.38□□□□□ -1.87
PRDM2-204ENST00000376048 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
PRDM2-204ENST00000376048 PRM1P04553 51 aa3.36□□□□□ -1.87
PRDM2-204ENST00000376048 KRTAP5-7Q6L8G8 165 aa3.34□□□□□ -1.88
PRDM2-204ENST00000376048 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
PRDM2-204ENST00000376048 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
PRDM2-204ENST00000376048 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
PRDM2-204ENST00000376048 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
PRDM2-204ENST00000376048 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
PRDM2-204ENST00000376048 MT4P47944 62 aa3.04□□□□□ -1.92
PRDM2-204ENST00000376048 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
PRDM2-204ENST00000376048 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
PRDM2-204ENST00000376048 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
PRDM2-204ENST00000376048 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.96
PRDM2-204ENST00000376048 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
PRDM2-204ENST00000376048 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
PRDM2-204ENST00000376048 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
PRDM2-204ENST00000376048 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
PRDM2-204ENST00000376048 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
PRDM2-204ENST00000376048 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
PRDM2-204ENST00000376048 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
PRDM2-204ENST00000376048 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
PRDM2-204ENST00000376048 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
PRDM2-204ENST00000376048 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
PRDM2-204ENST00000376048 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
PRDM2-204ENST00000376048 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
PRDM2-204ENST00000376048 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 80.5 ms