RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 MT1EP04732 61 aa6.04□□□□□ -1.44
PTPDC1-202ENST00000375360 MT1LQ93083 61 aa6.04□□□□□ -1.44
PTPDC1-202ENST00000375360 KRTAP19-6Q3LI70 58 aa6.03□□□□□ -1.44
PTPDC1-202ENST00000375360 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
PTPDC1-202ENST00000375360 USH2AO75445 5202 aa5.97□□□□□ -1.45
PTPDC1-202ENST00000375360 DSTQ03001 7570 aaKnown RBP5.87□□□□□ -1.47
PTPDC1-202ENST00000375360 KRTAP4-3Q9BYR4 195 aa5.87□□□□□ -1.47
PTPDC1-202ENST00000375360 FCGBPQ9Y6R7 5405 aaPredicted RBP5.84□□□□□ -1.48
PTPDC1-202ENST00000375360 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.48
PTPDC1-202ENST00000375360 MT1MQ8N339 61 aa5.8□□□□□ -1.48
PTPDC1-202ENST00000375360 LCE2DQ5TA82 110 aaPredicted RBP5.8□□□□□ -1.48
PTPDC1-202ENST00000375360 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
PTPDC1-202ENST00000375360 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
PTPDC1-202ENST00000375360 SYNE2Q8WXH0 6885 aaKnown RBP5.74□□□□□ -1.49
PTPDC1-202ENST00000375360 KMT2DO14686 5537 aa5.71□□□□□ -1.5
PTPDC1-202ENST00000375360 LCE3DQ9BYE3 92 aa5.6□□□□□ -1.51
PTPDC1-202ENST00000375360 KRTAP9-6A0A140TA67 174 aa5.59□□□□□ -1.51
PTPDC1-202ENST00000375360 MT4P47944 62 aa5.5□□□□□ -1.53
PTPDC1-202ENST00000375360 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.53
PTPDC1-202ENST00000375360 MUC12Q9UKN1 5478 aa5.43□□□□□ -1.54
PTPDC1-202ENST00000375360 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.55
PTPDC1-202ENST00000375360 SSPOA2VEC9 5147 aa5.4□□□□□ -1.55
PTPDC1-202ENST00000375360 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
PTPDC1-202ENST00000375360 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
PTPDC1-202ENST00000375360 MT3P25713 68 aa5.32□□□□□ -1.56
PTPDC1-202ENST00000375360 KRTAP4-9Q9BYQ8 210 aa5.3□□□□□ -1.56
PTPDC1-202ENST00000375360 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
PTPDC1-202ENST00000375360 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
PTPDC1-202ENST00000375360 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
PTPDC1-202ENST00000375360 MT1AP04731 61 aa5.25□□□□□ -1.57
PTPDC1-202ENST00000375360 KRTAP6-3Q3LI67 103 aa5.21□□□□□ -1.57
PTPDC1-202ENST00000375360 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
PTPDC1-202ENST00000375360 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
PTPDC1-202ENST00000375360 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
PTPDC1-202ENST00000375360 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
PTPDC1-202ENST00000375360 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
PTPDC1-202ENST00000375360 LCE1BQ5T7P3 118 aa5.04□□□□□ -1.6
PTPDC1-202ENST00000375360 MDN1Q9NU22 5596 aa5.01□□□□□ -1.61
PTPDC1-202ENST00000375360 PRM1P04553 51 aa5□□□□□ -1.61
PTPDC1-202ENST00000375360 KRTAP20-1Q3LI63 56 aa5□□□□□ -1.61
PTPDC1-202ENST00000375360 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
PTPDC1-202ENST00000375360 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
PTPDC1-202ENST00000375360 KRTAP2-2Q9BYT5 123 aa4.82□□□□□ -1.64
PTPDC1-202ENST00000375360 KRTAP5-9P26371 169 aa4.76□□□□□ -1.65
PTPDC1-202ENST00000375360 NEBP20929 6669 aa4.75□□□□□ -1.65
PTPDC1-202ENST00000375360 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
PTPDC1-202ENST00000375360 KRTAP4-6Q9BYQ5 205 aa4.52□□□□□ -1.69
PTPDC1-202ENST00000375360 MUC19Q7Z5P9 8384 aa4.49□□□□□ -1.69
PTPDC1-202ENST00000375360 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
PTPDC1-202ENST00000375360 GPR98Q8WXG9 6306 aa4.27□□□□□ -1.73
PTPDC1-202ENST00000375360 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
PTPDC1-202ENST00000375360 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
PTPDC1-202ENST00000375360 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
PTPDC1-202ENST00000375360 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
PTPDC1-202ENST00000375360 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
PTPDC1-202ENST00000375360 KRTAP9-9Q9BYP9 154 aa3.97□□□□□ -1.77
PTPDC1-202ENST00000375360 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
PTPDC1-202ENST00000375360 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.78
PTPDC1-202ENST00000375360 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
PTPDC1-202ENST00000375360 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
PTPDC1-202ENST00000375360 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
PTPDC1-202ENST00000375360 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
PTPDC1-202ENST00000375360 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.83
PTPDC1-202ENST00000375360 KRTAP5-3Q6L8H2 238 aa3.62□□□□□ -1.83
PTPDC1-202ENST00000375360 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
PTPDC1-202ENST00000375360 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
PTPDC1-202ENST00000375360 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
PTPDC1-202ENST00000375360 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
PTPDC1-202ENST00000375360 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
PTPDC1-202ENST00000375360 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
PTPDC1-202ENST00000375360 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
PTPDC1-202ENST00000375360 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
PTPDC1-202ENST00000375360 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
PTPDC1-202ENST00000375360 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
PTPDC1-202ENST00000375360 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
PTPDC1-202ENST00000375360 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
PTPDC1-202ENST00000375360 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 9.5 ms