RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
UBR4-203ENST00000375225 KMT2DO14686 5537 aa4.38□□□□□ -1.71
UBR4-203ENST00000375225 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
UBR4-203ENST00000375225 MT1EP04732 61 aa4.28□□□□□ -1.72
UBR4-203ENST00000375225 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
UBR4-203ENST00000375225 MT1LQ93083 61 aa4.26□□□□□ -1.73
UBR4-203ENST00000375225 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
UBR4-203ENST00000375225 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.74
UBR4-203ENST00000375225 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
UBR4-203ENST00000375225 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
UBR4-203ENST00000375225 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
UBR4-203ENST00000375225 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.74
UBR4-203ENST00000375225 KRTAP5-9P26371 169 aa4.15□□□□□ -1.75
UBR4-203ENST00000375225 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
UBR4-203ENST00000375225 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
UBR4-203ENST00000375225 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
UBR4-203ENST00000375225 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
UBR4-203ENST00000375225 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
UBR4-203ENST00000375225 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
UBR4-203ENST00000375225 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
UBR4-203ENST00000375225 MT1GP13640 62 aa4.08□□□□□ -1.76
UBR4-203ENST00000375225 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
UBR4-203ENST00000375225 SPRR2EP22531 72 aa4□□□□□ -1.77
UBR4-203ENST00000375225 SPRR2BP35325 72 aa4□□□□□ -1.77
UBR4-203ENST00000375225 SPRR2AP35326 72 aa4□□□□□ -1.77
UBR4-203ENST00000375225 MT1MQ8N339 61 aa4□□□□□ -1.77
UBR4-203ENST00000375225 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
UBR4-203ENST00000375225 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
UBR4-203ENST00000375225 MDN1Q9NU22 5596 aa3.94□□□□□ -1.78
UBR4-203ENST00000375225 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
UBR4-203ENST00000375225 SPRR2DP22532 72 aa3.86□□□□□ -1.79
UBR4-203ENST00000375225 MT3P25713 68 aa3.8□□□□□ -1.8
UBR4-203ENST00000375225 NEBP20929 6669 aa3.79□□□□□ -1.8
UBR4-203ENST00000375225 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
UBR4-203ENST00000375225 LCE1DQ5T752 114 aa3.71□□□□□ -1.82
UBR4-203ENST00000375225 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
UBR4-203ENST00000375225 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
UBR4-203ENST00000375225 MT1AP04731 61 aa3.65□□□□□ -1.83
UBR4-203ENST00000375225 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
UBR4-203ENST00000375225 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
UBR4-203ENST00000375225 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
UBR4-203ENST00000375225 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
UBR4-203ENST00000375225 KRTAP4-9Q9BYQ8 210 aa3.54□□□□□ -1.84
UBR4-203ENST00000375225 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
UBR4-203ENST00000375225 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
UBR4-203ENST00000375225 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
UBR4-203ENST00000375225 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
UBR4-203ENST00000375225 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
UBR4-203ENST00000375225 MT4P47944 62 aa3.33□□□□□ -1.88
UBR4-203ENST00000375225 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
UBR4-203ENST00000375225 GPR98Q8WXG9 6306 aa3.26□□□□□ -1.89
UBR4-203ENST00000375225 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
UBR4-203ENST00000375225 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
UBR4-203ENST00000375225 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
UBR4-203ENST00000375225 PRM1P04553 51 aa3.14□□□□□ -1.91
UBR4-203ENST00000375225 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
UBR4-203ENST00000375225 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
UBR4-203ENST00000375225 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
UBR4-203ENST00000375225 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
UBR4-203ENST00000375225 AHNAK2Q8IVF2 5795 aa2.85□□□□□ -1.95
UBR4-203ENST00000375225 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
UBR4-203ENST00000375225 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
UBR4-203ENST00000375225 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
UBR4-203ENST00000375225 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
UBR4-203ENST00000375225 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
UBR4-203ENST00000375225 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
UBR4-203ENST00000375225 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
UBR4-203ENST00000375225 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
UBR4-203ENST00000375225 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
UBR4-203ENST00000375225 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
UBR4-203ENST00000375225 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
UBR4-203ENST00000375225 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
UBR4-203ENST00000375225 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
UBR4-203ENST00000375225 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
UBR4-203ENST00000375225 PHGR1C9JFL3 82 aa1.96□□□□□ -2.09
UBR4-203ENST00000375225 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
UBR4-203ENST00000375225 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms