RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
NPLOC4-202ENST00000374747 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
NPLOC4-202ENST00000374747 MUC12Q9UKN1 5478 aa4.17□□□□□ -1.74
NPLOC4-202ENST00000374747 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
NPLOC4-202ENST00000374747 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
NPLOC4-202ENST00000374747 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
NPLOC4-202ENST00000374747 SPRR2DP22532 72 aa4.09□□□□□ -1.75
NPLOC4-202ENST00000374747 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
NPLOC4-202ENST00000374747 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
NPLOC4-202ENST00000374747 LCE2DQ5TA82 110 aaPredicted RBP4.06□□□□□ -1.76
NPLOC4-202ENST00000374747 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
NPLOC4-202ENST00000374747 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
NPLOC4-202ENST00000374747 MT1EP04732 61 aa4.04□□□□□ -1.76
NPLOC4-202ENST00000374747 MT1LQ93083 61 aa4.03□□□□□ -1.76
NPLOC4-202ENST00000374747 KRTAP9-2Q9BYQ4 174 aa4.02□□□□□ -1.77
NPLOC4-202ENST00000374747 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
NPLOC4-202ENST00000374747 MT1MQ8N339 61 aa3.88□□□□□ -1.79
NPLOC4-202ENST00000374747 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
NPLOC4-202ENST00000374747 PRM1P04553 51 aa3.79□□□□□ -1.8
NPLOC4-202ENST00000374747 MDN1Q9NU22 5596 aa3.77□□□□□ -1.81
NPLOC4-202ENST00000374747 KRTAP9-6A0A140TA67 174 aa3.77□□□□□ -1.81
NPLOC4-202ENST00000374747 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
NPLOC4-202ENST00000374747 MT3P25713 68 aa3.75□□□□□ -1.81
NPLOC4-202ENST00000374747 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
NPLOC4-202ENST00000374747 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
NPLOC4-202ENST00000374747 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
NPLOC4-202ENST00000374747 MACF1Q9UPN3 7388 aaKnown RBP3.71□□□□□ -1.82
NPLOC4-202ENST00000374747 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
NPLOC4-202ENST00000374747 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
NPLOC4-202ENST00000374747 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
NPLOC4-202ENST00000374747 MT1AP04731 61 aa3.58□□□□□ -1.84
NPLOC4-202ENST00000374747 MT4P47944 62 aa3.57□□□□□ -1.84
NPLOC4-202ENST00000374747 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
NPLOC4-202ENST00000374747 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
NPLOC4-202ENST00000374747 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
NPLOC4-202ENST00000374747 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
NPLOC4-202ENST00000374747 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
NPLOC4-202ENST00000374747 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.85
NPLOC4-202ENST00000374747 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
NPLOC4-202ENST00000374747 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
NPLOC4-202ENST00000374747 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
NPLOC4-202ENST00000374747 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
NPLOC4-202ENST00000374747 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
NPLOC4-202ENST00000374747 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
NPLOC4-202ENST00000374747 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
NPLOC4-202ENST00000374747 NEBP20929 6669 aa3.06□□□□□ -1.92
NPLOC4-202ENST00000374747 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
NPLOC4-202ENST00000374747 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
NPLOC4-202ENST00000374747 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
NPLOC4-202ENST00000374747 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
NPLOC4-202ENST00000374747 KRTAP4-6Q9BYQ5 205 aa2.89□□□□□ -1.95
NPLOC4-202ENST00000374747 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
NPLOC4-202ENST00000374747 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
NPLOC4-202ENST00000374747 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
NPLOC4-202ENST00000374747 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
NPLOC4-202ENST00000374747 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
NPLOC4-202ENST00000374747 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
NPLOC4-202ENST00000374747 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
NPLOC4-202ENST00000374747 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
NPLOC4-202ENST00000374747 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.01
NPLOC4-202ENST00000374747 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
NPLOC4-202ENST00000374747 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
NPLOC4-202ENST00000374747 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
NPLOC4-202ENST00000374747 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
NPLOC4-202ENST00000374747 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
NPLOC4-202ENST00000374747 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
NPLOC4-202ENST00000374747 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
NPLOC4-202ENST00000374747 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
NPLOC4-202ENST00000374747 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
NPLOC4-202ENST00000374747 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
NPLOC4-202ENST00000374747 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
NPLOC4-202ENST00000374747 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
NPLOC4-202ENST00000374747 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
NPLOC4-202ENST00000374747 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
NPLOC4-202ENST00000374747 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
NPLOC4-202ENST00000374747 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
NPLOC4-202ENST00000374747 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 88.6 ms