RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
RXRB-201ENST00000374680 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
RXRB-201ENST00000374680 LCE2DQ5TA82 110 aaPredicted RBP5.7□□□□□ -1.5
RXRB-201ENST00000374680 MT1GP13640 62 aa5.69□□□□□ -1.5
RXRB-201ENST00000374680 MACF1Q9UPN3 7388 aaKnown RBP5.64□□□□□ -1.51
RXRB-201ENST00000374680 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
RXRB-201ENST00000374680 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
RXRB-201ENST00000374680 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
RXRB-201ENST00000374680 SYNE1Q8NF91 8797 aaKnown RBP5.57□□□□□ -1.52
RXRB-201ENST00000374680 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
RXRB-201ENST00000374680 SPRR2FQ96RM1 72 aa5.57□□□□□ -1.52
RXRB-201ENST00000374680 SYNE2Q8WXH0 6885 aaKnown RBP5.56□□□□□ -1.52
RXRB-201ENST00000374680 MT1MQ8N339 61 aa5.54□□□□□ -1.52
RXRB-201ENST00000374680 KRTAP19-3Q7Z4W3 81 aa5.54□□□□□ -1.52
RXRB-201ENST00000374680 MDN1Q9NU22 5596 aa5.47□□□□□ -1.53
RXRB-201ENST00000374680 OBSCNQ5VST9 7968 aa5.35□□□□□ -1.55
RXRB-201ENST00000374680 LCE5AQ5TCM9 118 aa5.32□□□□□ -1.56
RXRB-201ENST00000374680 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
RXRB-201ENST00000374680 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
RXRB-201ENST00000374680 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
RXRB-201ENST00000374680 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
RXRB-201ENST00000374680 KRTAP9-6A0A140TA67 174 aa5.1□□□□□ -1.59
RXRB-201ENST00000374680 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
RXRB-201ENST00000374680 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
RXRB-201ENST00000374680 SPRR2EP22531 72 aa5.04□□□□□ -1.6
RXRB-201ENST00000374680 SPRR2BP35325 72 aa5.04□□□□□ -1.6
RXRB-201ENST00000374680 SPRR2AP35326 72 aa5.04□□□□□ -1.6
RXRB-201ENST00000374680 KRTAP5-9P26371 169 aa4.9□□□□□ -1.63
RXRB-201ENST00000374680 MT1AP04731 61 aa4.89□□□□□ -1.63
RXRB-201ENST00000374680 LCE3DQ9BYE3 92 aa4.81□□□□□ -1.64
RXRB-201ENST00000374680 SPRR2DP22532 72 aa4.8□□□□□ -1.64
RXRB-201ENST00000374680 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
RXRB-201ENST00000374680 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
RXRB-201ENST00000374680 KRTAP9-7A8MTY7 169 aa4.69□□□□□ -1.66
RXRB-201ENST00000374680 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.65□□□□□ -1.66
RXRB-201ENST00000374680 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
RXRB-201ENST00000374680 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
RXRB-201ENST00000374680 PRM1P04553 51 aa4.56□□□□□ -1.68
RXRB-201ENST00000374680 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
RXRB-201ENST00000374680 MT3P25713 68 aa4.43□□□□□ -1.7
RXRB-201ENST00000374680 MT4P47944 62 aa4.4□□□□□ -1.71
RXRB-201ENST00000374680 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
RXRB-201ENST00000374680 NEBP20929 6669 aa4.34□□□□□ -1.72
RXRB-201ENST00000374680 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
RXRB-201ENST00000374680 HMCN1Q96RW7 5635 aa4.15□□□□□ -1.75
RXRB-201ENST00000374680 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
RXRB-201ENST00000374680 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
RXRB-201ENST00000374680 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
RXRB-201ENST00000374680 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
RXRB-201ENST00000374680 KRTAP20-1Q3LI63 56 aa3.89□□□□□ -1.79
RXRB-201ENST00000374680 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
RXRB-201ENST00000374680 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
RXRB-201ENST00000374680 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
RXRB-201ENST00000374680 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
RXRB-201ENST00000374680 GPR98Q8WXG9 6306 aa3.63□□□□□ -1.83
RXRB-201ENST00000374680 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
RXRB-201ENST00000374680 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
RXRB-201ENST00000374680 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
RXRB-201ENST00000374680 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
RXRB-201ENST00000374680 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
RXRB-201ENST00000374680 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
RXRB-201ENST00000374680 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
RXRB-201ENST00000374680 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
RXRB-201ENST00000374680 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
RXRB-201ENST00000374680 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
RXRB-201ENST00000374680 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
RXRB-201ENST00000374680 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
RXRB-201ENST00000374680 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
RXRB-201ENST00000374680 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
RXRB-201ENST00000374680 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
RXRB-201ENST00000374680 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
RXRB-201ENST00000374680 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
RXRB-201ENST00000374680 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
RXRB-201ENST00000374680 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
RXRB-201ENST00000374680 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
RXRB-201ENST00000374680 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
RXRB-201ENST00000374680 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 159 ms