RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 SPRR2BP35325 72 aa5.79□□□□□ -1.48
PFDN6-202ENST00000374607 SPRR2AP35326 72 aa5.79□□□□□ -1.48
PFDN6-202ENST00000374607 KRTAP25-1Q3LHN0 102 aa5.73□□□□□ -1.49
PFDN6-202ENST00000374607 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
PFDN6-202ENST00000374607 KRTAP2-3P0C7H8 128 aa5.71□□□□□ -1.5
PFDN6-202ENST00000374607 KRTAP2-4Q9BYR9 128 aa5.71□□□□□ -1.5
PFDN6-202ENST00000374607 LCE3AQ5TA76 89 aa5.7□□□□□ -1.5
PFDN6-202ENST00000374607 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
PFDN6-202ENST00000374607 ROMO1P60602 79 aa5.65□□□□□ -1.5
PFDN6-202ENST00000374607 KRTAP19-7Q3SYF9 63 aa5.65□□□□□ -1.5
PFDN6-202ENST00000374607 BRK1Q8WUW1 75 aa5.63□□□□□ -1.51
PFDN6-202ENST00000374607 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
PFDN6-202ENST00000374607 MT1EP04732 61 aa5.61□□□□□ -1.51
PFDN6-202ENST00000374607 SPRR2DP22532 72 aa5.6□□□□□ -1.51
PFDN6-202ENST00000374607 LCE5AQ5TCM9 118 aa5.6□□□□□ -1.51
PFDN6-202ENST00000374607 LCE1DQ5T752 114 aa5.55□□□□□ -1.52
PFDN6-202ENST00000374607 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
PFDN6-202ENST00000374607 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
PFDN6-202ENST00000374607 KRTAP19-3Q7Z4W3 81 aa5.52□□□□□ -1.53
PFDN6-202ENST00000374607 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
PFDN6-202ENST00000374607 PP632Q6XCG6 107 aa5.46□□□□□ -1.54
PFDN6-202ENST00000374607 MT1GP13640 62 aa5.44□□□□□ -1.54
PFDN6-202ENST00000374607 MT1LQ93083 61 aa5.43□□□□□ -1.54
PFDN6-202ENST00000374607 GPR98Q8WXG9 6306 aa5.42□□□□□ -1.54
PFDN6-202ENST00000374607 MT1MQ8N339 61 aa5.33□□□□□ -1.56
PFDN6-202ENST00000374607 PMAIP1Q13794 54 aa5.31□□□□□ -1.56
PFDN6-202ENST00000374607 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
PFDN6-202ENST00000374607 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
PFDN6-202ENST00000374607 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
PFDN6-202ENST00000374607 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
PFDN6-202ENST00000374607 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
PFDN6-202ENST00000374607 PRO0628Q9UI54 55 aa5.17□□□□□ -1.58
PFDN6-202ENST00000374607 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
PFDN6-202ENST00000374607 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
PFDN6-202ENST00000374607 KRTAP4-2Q9BYR5 136 aa5.03□□□□□ -1.6
PFDN6-202ENST00000374607 MT4P47944 62 aa4.89□□□□□ -1.63
PFDN6-202ENST00000374607 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
PFDN6-202ENST00000374607 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
PFDN6-202ENST00000374607 KRTAP5-4Q6L8H1 288 aa4.86□□□□□ -1.63
PFDN6-202ENST00000374607 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
PFDN6-202ENST00000374607 MT3P25713 68 aa4.73□□□□□ -1.65
PFDN6-202ENST00000374607 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
PFDN6-202ENST00000374607 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
PFDN6-202ENST00000374607 AHNAK2Q8IVF2 5795 aa4.69□□□□□ -1.66
PFDN6-202ENST00000374607 MT1AP04731 61 aa4.63□□□□□ -1.67
PFDN6-202ENST00000374607 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
PFDN6-202ENST00000374607 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
PFDN6-202ENST00000374607 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
PFDN6-202ENST00000374607 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
PFDN6-202ENST00000374607 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
PFDN6-202ENST00000374607 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
PFDN6-202ENST00000374607 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
PFDN6-202ENST00000374607 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
PFDN6-202ENST00000374607 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
PFDN6-202ENST00000374607 KRTAP5-2Q701N4 177 aa4.28□□□□□ -1.72
PFDN6-202ENST00000374607 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
PFDN6-202ENST00000374607 AHNAKQ09666 5890 aaKnown RBP4.2□□□□□ -1.74
PFDN6-202ENST00000374607 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
PFDN6-202ENST00000374607 MUC5BQ9HC84 5762 aaPredicted RBP3.97□□□□□ -1.77
PFDN6-202ENST00000374607 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
PFDN6-202ENST00000374607 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
PFDN6-202ENST00000374607 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
PFDN6-202ENST00000374607 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
PFDN6-202ENST00000374607 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
PFDN6-202ENST00000374607 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
PFDN6-202ENST00000374607 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
PFDN6-202ENST00000374607 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
PFDN6-202ENST00000374607 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
PFDN6-202ENST00000374607 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
PFDN6-202ENST00000374607 INE1O15225 51 aa3.05□□□□□ -1.92
PFDN6-202ENST00000374607 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
PFDN6-202ENST00000374607 PRM1P04553 51 aa2.9□□□□□ -1.95
PFDN6-202ENST00000374607 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
PFDN6-202ENST00000374607 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
PFDN6-202ENST00000374607 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
PFDN6-202ENST00000374607 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
PFDN6-202ENST00000374607 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms