RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 MT1EP04732 61 aa5.88□□□□□ -1.47
LDLRAP1-201ENST00000374338 MT1LQ93083 61 aa5.87□□□□□ -1.47
LDLRAP1-201ENST00000374338 OBSCNQ5VST9 7968 aa5.87□□□□□ -1.47
LDLRAP1-201ENST00000374338 SYNE2Q8WXH0 6885 aaKnown RBP5.86□□□□□ -1.47
LDLRAP1-201ENST00000374338 MACF1Q9UPN3 7388 aaKnown RBP5.84□□□□□ -1.47
LDLRAP1-201ENST00000374338 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
LDLRAP1-201ENST00000374338 CRCT1Q9UGL9 99 aa5.8□□□□□ -1.48
LDLRAP1-201ENST00000374338 KRTAP19-6Q3LI70 58 aa5.78□□□□□ -1.48
LDLRAP1-201ENST00000374338 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
LDLRAP1-201ENST00000374338 LCE2DQ5TA82 110 aaPredicted RBP5.72□□□□□ -1.49
LDLRAP1-201ENST00000374338 MT1GP13640 62 aa5.69□□□□□ -1.5
LDLRAP1-201ENST00000374338 MDN1Q9NU22 5596 aa5.65□□□□□ -1.51
LDLRAP1-201ENST00000374338 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
LDLRAP1-201ENST00000374338 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
LDLRAP1-201ENST00000374338 MT1MQ8N339 61 aa5.52□□□□□ -1.53
LDLRAP1-201ENST00000374338 KRTAP19-3Q7Z4W3 81 aa5.51□□□□□ -1.53
LDLRAP1-201ENST00000374338 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
LDLRAP1-201ENST00000374338 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
LDLRAP1-201ENST00000374338 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
LDLRAP1-201ENST00000374338 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
LDLRAP1-201ENST00000374338 KRTAP9-2Q9BYQ4 174 aa5.24□□□□□ -1.57
LDLRAP1-201ENST00000374338 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
LDLRAP1-201ENST00000374338 KRTAP9-7A8MTY7 169 aa5.09□□□□□ -1.59
LDLRAP1-201ENST00000374338 PRM1P04553 51 aa5.08□□□□□ -1.6
LDLRAP1-201ENST00000374338 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
LDLRAP1-201ENST00000374338 SPRR2EP22531 72 aa5.03□□□□□ -1.6
LDLRAP1-201ENST00000374338 SPRR2BP35325 72 aa5.03□□□□□ -1.6
LDLRAP1-201ENST00000374338 SPRR2AP35326 72 aa5.03□□□□□ -1.6
LDLRAP1-201ENST00000374338 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
LDLRAP1-201ENST00000374338 KRTAP5-5Q701N2 237 aaPredicted RBP5.01□□□□□ -1.61
LDLRAP1-201ENST00000374338 KRTAP9-6A0A140TA67 174 aa4.97□□□□□ -1.61
LDLRAP1-201ENST00000374338 MT1AP04731 61 aa4.96□□□□□ -1.62
LDLRAP1-201ENST00000374338 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
LDLRAP1-201ENST00000374338 LCE3EQ5T5B0 92 aa4.92□□□□□ -1.62
LDLRAP1-201ENST00000374338 KRTAP2-2Q9BYT5 123 aa4.9□□□□□ -1.62
LDLRAP1-201ENST00000374338 KRTAP5-9P26371 169 aa4.88□□□□□ -1.63
LDLRAP1-201ENST00000374338 SPRR2DP22532 72 aa4.78□□□□□ -1.64
LDLRAP1-201ENST00000374338 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
LDLRAP1-201ENST00000374338 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.68□□□□□ -1.66
LDLRAP1-201ENST00000374338 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
LDLRAP1-201ENST00000374338 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
LDLRAP1-201ENST00000374338 NEBP20929 6669 aa4.47□□□□□ -1.69
LDLRAP1-201ENST00000374338 MT4P47944 62 aa4.42□□□□□ -1.7
LDLRAP1-201ENST00000374338 KRTAP4-6Q9BYQ5 205 aa4.39□□□□□ -1.71
LDLRAP1-201ENST00000374338 MT3P25713 68 aa4.36□□□□□ -1.71
LDLRAP1-201ENST00000374338 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
LDLRAP1-201ENST00000374338 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
LDLRAP1-201ENST00000374338 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
LDLRAP1-201ENST00000374338 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
LDLRAP1-201ENST00000374338 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
LDLRAP1-201ENST00000374338 LCE4AQ5TA78 99 aa3.89□□□□□ -1.79
LDLRAP1-201ENST00000374338 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
LDLRAP1-201ENST00000374338 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.8
LDLRAP1-201ENST00000374338 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
LDLRAP1-201ENST00000374338 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
LDLRAP1-201ENST00000374338 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
LDLRAP1-201ENST00000374338 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
LDLRAP1-201ENST00000374338 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
LDLRAP1-201ENST00000374338 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
LDLRAP1-201ENST00000374338 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
LDLRAP1-201ENST00000374338 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
LDLRAP1-201ENST00000374338 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
LDLRAP1-201ENST00000374338 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
LDLRAP1-201ENST00000374338 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
LDLRAP1-201ENST00000374338 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
LDLRAP1-201ENST00000374338 KRTAP21-1Q3LI58 79 aa3.25□□□□□ -1.89
LDLRAP1-201ENST00000374338 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
LDLRAP1-201ENST00000374338 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
LDLRAP1-201ENST00000374338 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
LDLRAP1-201ENST00000374338 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
LDLRAP1-201ENST00000374338 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
LDLRAP1-201ENST00000374338 KRTAP5-7Q6L8G8 165 aa2.92□□□□□ -1.94
LDLRAP1-201ENST00000374338 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
LDLRAP1-201ENST00000374338 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
LDLRAP1-201ENST00000374338 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
LDLRAP1-201ENST00000374338 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
LDLRAP1-201ENST00000374338 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 7.2 ms