RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 INE1O15225 51 aa5.41□□□□□ -1.54
CNKSR1-202ENST00000374253 DSTQ03001 7570 aaKnown RBP5.4□□□□□ -1.55
CNKSR1-202ENST00000374253 SYNE2Q8WXH0 6885 aaKnown RBP5.36□□□□□ -1.55
CNKSR1-202ENST00000374253 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
CNKSR1-202ENST00000374253 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
CNKSR1-202ENST00000374253 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
CNKSR1-202ENST00000374253 MT1GP13640 62 aa5.29□□□□□ -1.56
CNKSR1-202ENST00000374253 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
CNKSR1-202ENST00000374253 MT1MQ8N339 61 aa5.29□□□□□ -1.56
CNKSR1-202ENST00000374253 MDN1Q9NU22 5596 aa5.26□□□□□ -1.57
CNKSR1-202ENST00000374253 CRCT1Q9UGL9 99 aa5.26□□□□□ -1.57
CNKSR1-202ENST00000374253 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
CNKSR1-202ENST00000374253 KRTAP2-3P0C7H8 128 aa5.21□□□□□ -1.58
CNKSR1-202ENST00000374253 KRTAP2-4Q9BYR9 128 aa5.21□□□□□ -1.58
CNKSR1-202ENST00000374253 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
CNKSR1-202ENST00000374253 LCE5AQ5TCM9 118 aa5.15□□□□□ -1.58
CNKSR1-202ENST00000374253 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
CNKSR1-202ENST00000374253 SYNE1Q8NF91 8797 aaKnown RBP4.93□□□□□ -1.62
CNKSR1-202ENST00000374253 KRTAP5-9P26371 169 aa4.91□□□□□ -1.62
CNKSR1-202ENST00000374253 SPRR2EP22531 72 aa4.88□□□□□ -1.63
CNKSR1-202ENST00000374253 SPRR2BP35325 72 aa4.88□□□□□ -1.63
CNKSR1-202ENST00000374253 SPRR2AP35326 72 aa4.88□□□□□ -1.63
CNKSR1-202ENST00000374253 LCE3BQ5TA77 95 aa4.84□□□□□ -1.64
CNKSR1-202ENST00000374253 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
CNKSR1-202ENST00000374253 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
CNKSR1-202ENST00000374253 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.7□□□□□ -1.66
CNKSR1-202ENST00000374253 MT1AP04731 61 aa4.67□□□□□ -1.66
CNKSR1-202ENST00000374253 SPRR2DP22532 72 aa4.67□□□□□ -1.66
CNKSR1-202ENST00000374253 KRTAP5-5Q701N2 237 aaPredicted RBP4.66□□□□□ -1.66
CNKSR1-202ENST00000374253 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.67
CNKSR1-202ENST00000374253 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
CNKSR1-202ENST00000374253 KRTAP6-3Q3LI67 103 aa4.6□□□□□ -1.67
CNKSR1-202ENST00000374253 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
CNKSR1-202ENST00000374253 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
CNKSR1-202ENST00000374253 NEBP20929 6669 aa4.43□□□□□ -1.7
CNKSR1-202ENST00000374253 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
CNKSR1-202ENST00000374253 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
CNKSR1-202ENST00000374253 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
CNKSR1-202ENST00000374253 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
CNKSR1-202ENST00000374253 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
CNKSR1-202ENST00000374253 MT3P25713 68 aa4.21□□□□□ -1.74
CNKSR1-202ENST00000374253 MT4P47944 62 aa4.19□□□□□ -1.74
CNKSR1-202ENST00000374253 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
CNKSR1-202ENST00000374253 KRTAP4-6Q9BYQ5 205 aa4.18□□□□□ -1.74
CNKSR1-202ENST00000374253 PRM1P04553 51 aa4.08□□□□□ -1.76
CNKSR1-202ENST00000374253 HMCN1Q96RW7 5635 aa4.07□□□□□ -1.76
CNKSR1-202ENST00000374253 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
CNKSR1-202ENST00000374253 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
CNKSR1-202ENST00000374253 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
CNKSR1-202ENST00000374253 LCE4AQ5TA78 99 aa3.96□□□□□ -1.78
CNKSR1-202ENST00000374253 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
CNKSR1-202ENST00000374253 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
CNKSR1-202ENST00000374253 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
CNKSR1-202ENST00000374253 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
CNKSR1-202ENST00000374253 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
CNKSR1-202ENST00000374253 MUC5ACP98088 5654 aa3.65□□□□□ -1.82
CNKSR1-202ENST00000374253 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
CNKSR1-202ENST00000374253 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
CNKSR1-202ENST00000374253 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
CNKSR1-202ENST00000374253 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
CNKSR1-202ENST00000374253 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
CNKSR1-202ENST00000374253 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
CNKSR1-202ENST00000374253 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
CNKSR1-202ENST00000374253 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
CNKSR1-202ENST00000374253 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
CNKSR1-202ENST00000374253 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
CNKSR1-202ENST00000374253 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
CNKSR1-202ENST00000374253 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
CNKSR1-202ENST00000374253 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
CNKSR1-202ENST00000374253 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
CNKSR1-202ENST00000374253 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
CNKSR1-202ENST00000374253 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
CNKSR1-202ENST00000374253 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
CNKSR1-202ENST00000374253 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
CNKSR1-202ENST00000374253 PHGR1C9JFL3 82 aa2.46□□□□□ -2.01
CNKSR1-202ENST00000374253 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
CNKSR1-202ENST00000374253 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 79.6 ms