RNA–Protein interactions for RNA: ENST00000373832.5

RCC1-202, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1, Length 2,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-202ENST00000373832 KRTAP9-6A0A140TA67 174 aa5.75□□□□□ -1.49
RCC1-202ENST00000373832 KRTAP4-3Q9BYR4 195 aa5.72□□□□□ -1.49
RCC1-202ENST00000373832 LOC100996750A0A140TA64 210 aa5.7□□□□□ -1.5
RCC1-202ENST00000373832 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
RCC1-202ENST00000373832 MT1GP13640 62 aa5.67□□□□□ -1.5
RCC1-202ENST00000373832 FSIP2Q5CZC0 6907 aa5.64□□□□□ -1.51
RCC1-202ENST00000373832 MT1MQ8N339 61 aa5.64□□□□□ -1.51
RCC1-202ENST00000373832 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
RCC1-202ENST00000373832 FCGBPQ9Y6R7 5405 aaPredicted RBP5.59□□□□□ -1.52
RCC1-202ENST00000373832 CRCT1Q9UGL9 99 aa5.56□□□□□ -1.52
RCC1-202ENST00000373832 MUC12Q9UKN1 5478 aa5.53□□□□□ -1.52
RCC1-202ENST00000373832 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
RCC1-202ENST00000373832 SPRR2FQ96RM1 72 aa5.4□□□□□ -1.54
RCC1-202ENST00000373832 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
RCC1-202ENST00000373832 DSTQ03001 7570 aaKnown RBP5.27□□□□□ -1.57
RCC1-202ENST00000373832 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
RCC1-202ENST00000373832 KRTAP4-9Q9BYQ8 210 aa5.15□□□□□ -1.59
RCC1-202ENST00000373832 KRTAP9-7A8MTY7 169 aa5.14□□□□□ -1.59
RCC1-202ENST00000373832 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
RCC1-202ENST00000373832 MACF1Q9UPN3 7388 aaKnown RBP5.13□□□□□ -1.59
RCC1-202ENST00000373832 MT1AP04731 61 aa5.12□□□□□ -1.59
RCC1-202ENST00000373832 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.11□□□□□ -1.59
RCC1-202ENST00000373832 LCE1AQ5T7P2 110 aa5□□□□□ -1.61
RCC1-202ENST00000373832 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
RCC1-202ENST00000373832 SYNE1Q8NF91 8797 aaKnown RBP4.97□□□□□ -1.61
RCC1-202ENST00000373832 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
RCC1-202ENST00000373832 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
RCC1-202ENST00000373832 KRTAP5-9P26371 169 aa4.94□□□□□ -1.62
RCC1-202ENST00000373832 SYNE2Q8WXH0 6885 aaKnown RBP4.94□□□□□ -1.62
RCC1-202ENST00000373832 LCE3EQ5T5B0 92 aa4.93□□□□□ -1.62
RCC1-202ENST00000373832 SPRR2EP22531 72 aa4.89□□□□□ -1.63
RCC1-202ENST00000373832 SPRR2BP35325 72 aa4.89□□□□□ -1.63
RCC1-202ENST00000373832 SPRR2AP35326 72 aa4.89□□□□□ -1.63
RCC1-202ENST00000373832 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
RCC1-202ENST00000373832 PRM1P04553 51 aa4.75□□□□□ -1.65
RCC1-202ENST00000373832 SPRR2DP22532 72 aa4.68□□□□□ -1.66
RCC1-202ENST00000373832 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
RCC1-202ENST00000373832 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
RCC1-202ENST00000373832 MT3P25713 68 aa4.57□□□□□ -1.68
RCC1-202ENST00000373832 NEBP20929 6669 aa4.55□□□□□ -1.68
RCC1-202ENST00000373832 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
RCC1-202ENST00000373832 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.72
RCC1-202ENST00000373832 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
RCC1-202ENST00000373832 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
RCC1-202ENST00000373832 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
RCC1-202ENST00000373832 MT4P47944 62 aa4.13□□□□□ -1.75
RCC1-202ENST00000373832 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
RCC1-202ENST00000373832 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
RCC1-202ENST00000373832 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
RCC1-202ENST00000373832 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
RCC1-202ENST00000373832 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
RCC1-202ENST00000373832 HMCN1Q96RW7 5635 aa3.85□□□□□ -1.79
RCC1-202ENST00000373832 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
RCC1-202ENST00000373832 LCE1DQ5T752 114 aa3.84□□□□□ -1.8
RCC1-202ENST00000373832 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
RCC1-202ENST00000373832 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
RCC1-202ENST00000373832 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
RCC1-202ENST00000373832 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
RCC1-202ENST00000373832 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
RCC1-202ENST00000373832 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
RCC1-202ENST00000373832 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
RCC1-202ENST00000373832 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
RCC1-202ENST00000373832 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
RCC1-202ENST00000373832 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
RCC1-202ENST00000373832 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
RCC1-202ENST00000373832 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
RCC1-202ENST00000373832 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
RCC1-202ENST00000373832 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
RCC1-202ENST00000373832 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
RCC1-202ENST00000373832 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
RCC1-202ENST00000373832 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
RCC1-202ENST00000373832 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
RCC1-202ENST00000373832 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
RCC1-202ENST00000373832 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
RCC1-202ENST00000373832 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
RCC1-202ENST00000373832 PHGR1C9JFL3 82 aa2.58□□□□□ -2
RCC1-202ENST00000373832 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 9.4 ms