RNA–Protein interactions for RNA: ENST00000373741.8

PUM1-202, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-202ENST00000373741 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
PUM1-202ENST00000373741 KRTAP19-7Q3SYF9 63 aa4.1□□□□□ -1.75
PUM1-202ENST00000373741 MT1EP04732 61 aa4.05□□□□□ -1.76
PUM1-202ENST00000373741 MT1LQ93083 61 aa4□□□□□ -1.77
PUM1-202ENST00000373741 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
PUM1-202ENST00000373741 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
PUM1-202ENST00000373741 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
PUM1-202ENST00000373741 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
PUM1-202ENST00000373741 MT1GP13640 62 aa3.91□□□□□ -1.78
PUM1-202ENST00000373741 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
PUM1-202ENST00000373741 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.79
PUM1-202ENST00000373741 SPRR2EP22531 72 aa3.89□□□□□ -1.79
PUM1-202ENST00000373741 SPRR2BP35325 72 aa3.89□□□□□ -1.79
PUM1-202ENST00000373741 SPRR2AP35326 72 aa3.89□□□□□ -1.79
PUM1-202ENST00000373741 LOC100996750A0A140TA64 210 aa3.88□□□□□ -1.79
PUM1-202ENST00000373741 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
PUM1-202ENST00000373741 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
PUM1-202ENST00000373741 MT1MQ8N339 61 aa3.84□□□□□ -1.79
PUM1-202ENST00000373741 KRTAP2-3P0C7H8 128 aa3.8□□□□□ -1.8
PUM1-202ENST00000373741 KRTAP2-4Q9BYR9 128 aa3.8□□□□□ -1.8
PUM1-202ENST00000373741 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
PUM1-202ENST00000373741 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
PUM1-202ENST00000373741 SPRR2DP22532 72 aa3.73□□□□□ -1.81
PUM1-202ENST00000373741 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
PUM1-202ENST00000373741 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
PUM1-202ENST00000373741 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
PUM1-202ENST00000373741 KRTAP9-7A8MTY7 169 aa3.64□□□□□ -1.83
PUM1-202ENST00000373741 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
PUM1-202ENST00000373741 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
PUM1-202ENST00000373741 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
PUM1-202ENST00000373741 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
PUM1-202ENST00000373741 PRM1P04553 51 aa3.45□□□□□ -1.86
PUM1-202ENST00000373741 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
PUM1-202ENST00000373741 NEBP20929 6669 aa3.43□□□□□ -1.86
PUM1-202ENST00000373741 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
PUM1-202ENST00000373741 MT4P47944 62 aa3.4□□□□□ -1.86
PUM1-202ENST00000373741 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
PUM1-202ENST00000373741 MT1AP04731 61 aa3.35□□□□□ -1.87
PUM1-202ENST00000373741 KRTAP20-1Q3LI63 56 aa3.22□□□□□ -1.89
PUM1-202ENST00000373741 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
PUM1-202ENST00000373741 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
PUM1-202ENST00000373741 KRTAP4-6Q9BYQ5 205 aa3.2□□□□□ -1.9
PUM1-202ENST00000373741 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
PUM1-202ENST00000373741 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
PUM1-202ENST00000373741 MT3P25713 68 aa3.13□□□□□ -1.91
PUM1-202ENST00000373741 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
PUM1-202ENST00000373741 LCE1DQ5T752 114 aa3.09□□□□□ -1.91
PUM1-202ENST00000373741 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
PUM1-202ENST00000373741 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
PUM1-202ENST00000373741 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
PUM1-202ENST00000373741 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
PUM1-202ENST00000373741 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
PUM1-202ENST00000373741 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
PUM1-202ENST00000373741 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
PUM1-202ENST00000373741 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
PUM1-202ENST00000373741 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
PUM1-202ENST00000373741 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
PUM1-202ENST00000373741 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
PUM1-202ENST00000373741 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
PUM1-202ENST00000373741 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
PUM1-202ENST00000373741 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
PUM1-202ENST00000373741 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
PUM1-202ENST00000373741 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
PUM1-202ENST00000373741 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
PUM1-202ENST00000373741 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
PUM1-202ENST00000373741 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
PUM1-202ENST00000373741 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
PUM1-202ENST00000373741 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
PUM1-202ENST00000373741 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
PUM1-202ENST00000373741 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
PUM1-202ENST00000373741 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.08
PUM1-202ENST00000373741 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
PUM1-202ENST00000373741 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
PUM1-202ENST00000373741 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
PUM1-202ENST00000373741 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
PUM1-202ENST00000373741 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
PUM1-202ENST00000373741 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 15 ms