RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 MDN1Q9NU22 5596 aa3.65□□□□□ -1.83
PGK1-201ENST00000373316 KRTAP19-6Q3LI70 58 aa3.64□□□□□ -1.83
PGK1-201ENST00000373316 KRTAP4-7Q9BYR0 210 aa3.62□□□□□ -1.83
PGK1-201ENST00000373316 LCE2DQ5TA82 110 aaPredicted RBP3.6□□□□□ -1.83
PGK1-201ENST00000373316 MT1LQ93083 61 aa3.6□□□□□ -1.83
PGK1-201ENST00000373316 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
PGK1-201ENST00000373316 MT1EP04732 61 aa3.55□□□□□ -1.84
PGK1-201ENST00000373316 KRTAP19-3Q7Z4W3 81 aa3.52□□□□□ -1.85
PGK1-201ENST00000373316 SPRR2EP22531 72 aa3.5□□□□□ -1.85
PGK1-201ENST00000373316 SPRR2BP35325 72 aa3.5□□□□□ -1.85
PGK1-201ENST00000373316 SPRR2AP35326 72 aa3.5□□□□□ -1.85
PGK1-201ENST00000373316 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
PGK1-201ENST00000373316 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
PGK1-201ENST00000373316 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
PGK1-201ENST00000373316 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
PGK1-201ENST00000373316 SPRR2DP22532 72 aa3.42□□□□□ -1.86
PGK1-201ENST00000373316 LOC100996750A0A140TA64 210 aa3.39□□□□□ -1.87
PGK1-201ENST00000373316 LCE3BQ5TA77 95 aa3.39□□□□□ -1.87
PGK1-201ENST00000373316 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
PGK1-201ENST00000373316 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
PGK1-201ENST00000373316 MT1MQ8N339 61 aa3.35□□□□□ -1.87
PGK1-201ENST00000373316 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
PGK1-201ENST00000373316 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
PGK1-201ENST00000373316 KRTAP2-3P0C7H8 128 aa3.31□□□□□ -1.88
PGK1-201ENST00000373316 KRTAP2-4Q9BYR9 128 aa3.31□□□□□ -1.88
PGK1-201ENST00000373316 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
PGK1-201ENST00000373316 MT3P25713 68 aa3.28□□□□□ -1.88
PGK1-201ENST00000373316 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.27□□□□□ -1.89
PGK1-201ENST00000373316 MT1AP04731 61 aa3.23□□□□□ -1.89
PGK1-201ENST00000373316 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
PGK1-201ENST00000373316 LCE5AQ5TCM9 118 aa3.2□□□□□ -1.9
PGK1-201ENST00000373316 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
PGK1-201ENST00000373316 KRTAP9-7A8MTY7 169 aa3.08□□□□□ -1.92
PGK1-201ENST00000373316 NEBP20929 6669 aa3.08□□□□□ -1.92
PGK1-201ENST00000373316 KRTAP6-3Q3LI67 103 aa3.05□□□□□ -1.92
PGK1-201ENST00000373316 PRM1P04553 51 aa3.03□□□□□ -1.93
PGK1-201ENST00000373316 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
PGK1-201ENST00000373316 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
PGK1-201ENST00000373316 KRTAP9-4Q9BYQ2 154 aa2.95□□□□□ -1.94
PGK1-201ENST00000373316 LCE4AQ5TA78 99 aa2.94□□□□□ -1.94
PGK1-201ENST00000373316 MT4P47944 62 aa2.86□□□□□ -1.95
PGK1-201ENST00000373316 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
PGK1-201ENST00000373316 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
PGK1-201ENST00000373316 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
PGK1-201ENST00000373316 KRTAP4-6Q9BYQ5 205 aa2.8□□□□□ -1.96
PGK1-201ENST00000373316 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
PGK1-201ENST00000373316 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
PGK1-201ENST00000373316 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
PGK1-201ENST00000373316 KRTAP2-2Q9BYT5 123 aa2.7□□□□□ -1.98
PGK1-201ENST00000373316 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
PGK1-201ENST00000373316 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
PGK1-201ENST00000373316 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
PGK1-201ENST00000373316 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
PGK1-201ENST00000373316 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
PGK1-201ENST00000373316 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
PGK1-201ENST00000373316 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
PGK1-201ENST00000373316 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
PGK1-201ENST00000373316 KRTAP9-9Q9BYP9 154 aa2.29□□□□□ -2.04
PGK1-201ENST00000373316 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
PGK1-201ENST00000373316 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
PGK1-201ENST00000373316 KRTAP4-11Q9BYQ6 195 aa2.22□□□□□ -2.05
PGK1-201ENST00000373316 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
PGK1-201ENST00000373316 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
PGK1-201ENST00000373316 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
PGK1-201ENST00000373316 KRTAP4-2Q9BYR5 136 aa2.08□□□□□ -2.08
PGK1-201ENST00000373316 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
PGK1-201ENST00000373316 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
PGK1-201ENST00000373316 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
PGK1-201ENST00000373316 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
PGK1-201ENST00000373316 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
PGK1-201ENST00000373316 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
PGK1-201ENST00000373316 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
PGK1-201ENST00000373316 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.76□□□□□ -2.13
PGK1-201ENST00000373316 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
PGK1-201ENST00000373316 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
PGK1-201ENST00000373316 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
PGK1-201ENST00000373316 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 17.2 ms