RNA–Protein interactions for RNA: ENST00000373087.6

ZC3H12A-201, Transcript of zinc finger CCCH-type containing 12A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZC3H12A, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12A-201ENST00000373087 KRTAP9-2Q9BYQ4 174 aa5.69□□□□□ -1.5
ZC3H12A-201ENST00000373087 MACF1Q9UPN3 7388 aaKnown RBP5.66□□□□□ -1.5
ZC3H12A-201ENST00000373087 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
ZC3H12A-201ENST00000373087 KRTAP4-3Q9BYR4 195 aa5.63□□□□□ -1.51
ZC3H12A-201ENST00000373087 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
ZC3H12A-201ENST00000373087 MT1GP13640 62 aa5.57□□□□□ -1.52
ZC3H12A-201ENST00000373087 MT1MQ8N339 61 aa5.57□□□□□ -1.52
ZC3H12A-201ENST00000373087 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
ZC3H12A-201ENST00000373087 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
ZC3H12A-201ENST00000373087 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
ZC3H12A-201ENST00000373087 KRTAP2-3P0C7H8 128 aa5.48□□□□□ -1.53
ZC3H12A-201ENST00000373087 KRTAP2-4Q9BYR9 128 aa5.48□□□□□ -1.53
ZC3H12A-201ENST00000373087 KRTAP2-1Q9BYU5 128 aa5.48□□□□□ -1.53
ZC3H12A-201ENST00000373087 DSTQ03001 7570 aaKnown RBP5.46□□□□□ -1.53
ZC3H12A-201ENST00000373087 LCE5AQ5TCM9 118 aa5.46□□□□□ -1.54
ZC3H12A-201ENST00000373087 MDN1Q9NU22 5596 aa5.38□□□□□ -1.55
ZC3H12A-201ENST00000373087 KRTAP9-6A0A140TA67 174 aa5.3□□□□□ -1.56
ZC3H12A-201ENST00000373087 KRTAP5-9P26371 169 aa5.29□□□□□ -1.56
ZC3H12A-201ENST00000373087 LCE1AQ5T7P2 110 aa5.27□□□□□ -1.57
ZC3H12A-201ENST00000373087 SPRR2EP22531 72 aa5.22□□□□□ -1.57
ZC3H12A-201ENST00000373087 SPRR2BP35325 72 aa5.22□□□□□ -1.57
ZC3H12A-201ENST00000373087 SPRR2AP35326 72 aa5.22□□□□□ -1.57
ZC3H12A-201ENST00000373087 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.1□□□□□ -1.59
ZC3H12A-201ENST00000373087 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
ZC3H12A-201ENST00000373087 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
ZC3H12A-201ENST00000373087 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
ZC3H12A-201ENST00000373087 SPRR2DP22532 72 aa5□□□□□ -1.61
ZC3H12A-201ENST00000373087 MT1AP04731 61 aa4.94□□□□□ -1.62
ZC3H12A-201ENST00000373087 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
ZC3H12A-201ENST00000373087 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
ZC3H12A-201ENST00000373087 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
ZC3H12A-201ENST00000373087 KRTAP12-4P60329 112 aa4.84□□□□□ -1.63
ZC3H12A-201ENST00000373087 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
ZC3H12A-201ENST00000373087 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
ZC3H12A-201ENST00000373087 NEBP20929 6669 aa4.65□□□□□ -1.66
ZC3H12A-201ENST00000373087 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
ZC3H12A-201ENST00000373087 KRTAP6-2Q3LI66 62 aa4.55□□□□□ -1.68
ZC3H12A-201ENST00000373087 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
ZC3H12A-201ENST00000373087 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
ZC3H12A-201ENST00000373087 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
ZC3H12A-201ENST00000373087 MT3P25713 68 aa4.47□□□□□ -1.69
ZC3H12A-201ENST00000373087 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
ZC3H12A-201ENST00000373087 MT4P47944 62 aa4.42□□□□□ -1.7
ZC3H12A-201ENST00000373087 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.7
ZC3H12A-201ENST00000373087 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
ZC3H12A-201ENST00000373087 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
ZC3H12A-201ENST00000373087 PRM1P04553 51 aa4.25□□□□□ -1.73
ZC3H12A-201ENST00000373087 HMCN1Q96RW7 5635 aa4.23□□□□□ -1.73
ZC3H12A-201ENST00000373087 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
ZC3H12A-201ENST00000373087 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
ZC3H12A-201ENST00000373087 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
ZC3H12A-201ENST00000373087 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
ZC3H12A-201ENST00000373087 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
ZC3H12A-201ENST00000373087 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
ZC3H12A-201ENST00000373087 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
ZC3H12A-201ENST00000373087 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
ZC3H12A-201ENST00000373087 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
ZC3H12A-201ENST00000373087 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
ZC3H12A-201ENST00000373087 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
ZC3H12A-201ENST00000373087 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
ZC3H12A-201ENST00000373087 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
ZC3H12A-201ENST00000373087 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
ZC3H12A-201ENST00000373087 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
ZC3H12A-201ENST00000373087 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
ZC3H12A-201ENST00000373087 KRTAP5-7Q6L8G8 165 aa3.3□□□□□ -1.88
ZC3H12A-201ENST00000373087 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
ZC3H12A-201ENST00000373087 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
ZC3H12A-201ENST00000373087 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
ZC3H12A-201ENST00000373087 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
ZC3H12A-201ENST00000373087 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
ZC3H12A-201ENST00000373087 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
ZC3H12A-201ENST00000373087 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
ZC3H12A-201ENST00000373087 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
ZC3H12A-201ENST00000373087 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
ZC3H12A-201ENST00000373087 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
ZC3H12A-201ENST00000373087 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
ZC3H12A-201ENST00000373087 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms