RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 KRTAP4-3Q9BYR4 195 aa5.87□□□□□ -1.47
HNF4A-203ENST00000372920 FSIP2Q5CZC0 6907 aa5.85□□□□□ -1.47
HNF4A-203ENST00000372920 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
HNF4A-203ENST00000372920 MT1GP13640 62 aa5.81□□□□□ -1.48
HNF4A-203ENST00000372920 LCE2DQ5TA82 110 aaPredicted RBP5.76□□□□□ -1.49
HNF4A-203ENST00000372920 MT1MQ8N339 61 aa5.73□□□□□ -1.49
HNF4A-203ENST00000372920 FCGBPQ9Y6R7 5405 aaPredicted RBP5.71□□□□□ -1.5
HNF4A-203ENST00000372920 KRTAP19-3Q7Z4W3 81 aa5.69□□□□□ -1.5
HNF4A-203ENST00000372920 CRCT1Q9UGL9 99 aa5.69□□□□□ -1.5
HNF4A-203ENST00000372920 MUC12Q9UKN1 5478 aa5.68□□□□□ -1.5
HNF4A-203ENST00000372920 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
HNF4A-203ENST00000372920 KRTAP9-2Q9BYQ4 174 aa5.56□□□□□ -1.52
HNF4A-203ENST00000372920 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
HNF4A-203ENST00000372920 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
HNF4A-203ENST00000372920 LCE3BQ5TA77 95 aa5.43□□□□□ -1.54
HNF4A-203ENST00000372920 SPRR2FQ96RM1 72 aa5.39□□□□□ -1.55
HNF4A-203ENST00000372920 KRTAP4-9Q9BYQ8 210 aa5.37□□□□□ -1.55
HNF4A-203ENST00000372920 MT1AP04731 61 aa5.28□□□□□ -1.56
HNF4A-203ENST00000372920 KRTAP6-1Q3LI64 71 aa5.26□□□□□ -1.57
HNF4A-203ENST00000372920 SYNE1Q8NF91 8797 aaKnown RBP5.2□□□□□ -1.58
HNF4A-203ENST00000372920 KRTAP9-6A0A140TA67 174 aa5.19□□□□□ -1.58
HNF4A-203ENST00000372920 LCE3DQ9BYE3 92 aa5.17□□□□□ -1.58
HNF4A-203ENST00000372920 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
HNF4A-203ENST00000372920 LCE3EQ5T5B0 92 aa5.12□□□□□ -1.59
HNF4A-203ENST00000372920 KRTAP5-5Q701N2 237 aaPredicted RBP5.07□□□□□ -1.6
HNF4A-203ENST00000372920 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
HNF4A-203ENST00000372920 MDN1Q9NU22 5596 aa5.03□□□□□ -1.6
HNF4A-203ENST00000372920 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
HNF4A-203ENST00000372920 PRM1P04553 51 aa5.01□□□□□ -1.61
HNF4A-203ENST00000372920 LCE1AQ5T7P2 110 aa4.98□□□□□ -1.61
HNF4A-203ENST00000372920 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.91□□□□□ -1.62
HNF4A-203ENST00000372920 KRTAP5-9P26371 169 aa4.87□□□□□ -1.63
HNF4A-203ENST00000372920 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
HNF4A-203ENST00000372920 SPRR2EP22531 72 aa4.82□□□□□ -1.64
HNF4A-203ENST00000372920 SPRR2BP35325 72 aa4.82□□□□□ -1.64
HNF4A-203ENST00000372920 SPRR2AP35326 72 aa4.82□□□□□ -1.64
HNF4A-203ENST00000372920 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
HNF4A-203ENST00000372920 MT3P25713 68 aa4.63□□□□□ -1.67
HNF4A-203ENST00000372920 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
HNF4A-203ENST00000372920 SPRR2DP22532 72 aa4.59□□□□□ -1.67
HNF4A-203ENST00000372920 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
HNF4A-203ENST00000372920 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
HNF4A-203ENST00000372920 NEBP20929 6669 aa4.41□□□□□ -1.7
HNF4A-203ENST00000372920 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
HNF4A-203ENST00000372920 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
HNF4A-203ENST00000372920 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
HNF4A-203ENST00000372920 MT4P47944 62 aa4.09□□□□□ -1.76
HNF4A-203ENST00000372920 KRTAP5-2Q701N4 177 aa4.06□□□□□ -1.76
HNF4A-203ENST00000372920 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
HNF4A-203ENST00000372920 MUC5ACP98088 5654 aa3.96□□□□□ -1.78
HNF4A-203ENST00000372920 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
HNF4A-203ENST00000372920 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
HNF4A-203ENST00000372920 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
HNF4A-203ENST00000372920 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
HNF4A-203ENST00000372920 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
HNF4A-203ENST00000372920 KRTAP5-10Q6L8G5 202 aa3.76□□□□□ -1.81
HNF4A-203ENST00000372920 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
HNF4A-203ENST00000372920 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
HNF4A-203ENST00000372920 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
HNF4A-203ENST00000372920 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
HNF4A-203ENST00000372920 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
HNF4A-203ENST00000372920 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
HNF4A-203ENST00000372920 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
HNF4A-203ENST00000372920 AHNAK2Q8IVF2 5795 aa3.33□□□□□ -1.88
HNF4A-203ENST00000372920 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
HNF4A-203ENST00000372920 KRTAP21-1Q3LI58 79 aa3.16□□□□□ -1.9
HNF4A-203ENST00000372920 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
HNF4A-203ENST00000372920 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
HNF4A-203ENST00000372920 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.91
HNF4A-203ENST00000372920 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
HNF4A-203ENST00000372920 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
HNF4A-203ENST00000372920 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
HNF4A-203ENST00000372920 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.96
HNF4A-203ENST00000372920 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
HNF4A-203ENST00000372920 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
HNF4A-203ENST00000372920 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
HNF4A-203ENST00000372920 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
HNF4A-203ENST00000372920 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 30.8 ms