RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
EXOSC1-202ENST00000370885 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
EXOSC1-202ENST00000370885 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
EXOSC1-202ENST00000370885 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
EXOSC1-202ENST00000370885 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
EXOSC1-202ENST00000370885 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
EXOSC1-202ENST00000370885 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
EXOSC1-202ENST00000370885 SPRR2DP22532 72 aa4.31□□□□□ -1.72
EXOSC1-202ENST00000370885 CAMK2N1Q7Z7J9 78 aa4.31□□□□□ -1.72
EXOSC1-202ENST00000370885 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
EXOSC1-202ENST00000370885 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
EXOSC1-202ENST00000370885 LUZP6Q538Z0 58 aa4.23□□□□□ -1.73
EXOSC1-202ENST00000370885 LCE3BQ5TA77 95 aa4.21□□□□□ -1.74
EXOSC1-202ENST00000370885 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
EXOSC1-202ENST00000370885 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
EXOSC1-202ENST00000370885 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
EXOSC1-202ENST00000370885 TNP1P09430 55 aa4.15□□□□□ -1.75
EXOSC1-202ENST00000370885 GPR98Q8WXG9 6306 aa4.15□□□□□ -1.75
EXOSC1-202ENST00000370885 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
EXOSC1-202ENST00000370885 MT1EP04732 61 aa4.11□□□□□ -1.75
EXOSC1-202ENST00000370885 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
EXOSC1-202ENST00000370885 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
EXOSC1-202ENST00000370885 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
EXOSC1-202ENST00000370885 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
EXOSC1-202ENST00000370885 KRTAP19-5Q3LI72 72 aa4.02□□□□□ -1.77
EXOSC1-202ENST00000370885 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
EXOSC1-202ENST00000370885 LCE3AQ5TA76 89 aa3.96□□□□□ -1.78
EXOSC1-202ENST00000370885 MT1GP13640 62 aa3.94□□□□□ -1.78
EXOSC1-202ENST00000370885 MT1MQ8N339 61 aa3.91□□□□□ -1.78
EXOSC1-202ENST00000370885 MT1LQ93083 61 aa3.91□□□□□ -1.78
EXOSC1-202ENST00000370885 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.79
EXOSC1-202ENST00000370885 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
EXOSC1-202ENST00000370885 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
EXOSC1-202ENST00000370885 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
EXOSC1-202ENST00000370885 MT4P47944 62 aa3.8□□□□□ -1.8
EXOSC1-202ENST00000370885 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
EXOSC1-202ENST00000370885 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
EXOSC1-202ENST00000370885 INE1O15225 51 aa3.78□□□□□ -1.8
EXOSC1-202ENST00000370885 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
EXOSC1-202ENST00000370885 KRTAP5-4Q6L8H1 288 aa3.77□□□□□ -1.81
EXOSC1-202ENST00000370885 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
EXOSC1-202ENST00000370885 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
EXOSC1-202ENST00000370885 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
EXOSC1-202ENST00000370885 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
EXOSC1-202ENST00000370885 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.83
EXOSC1-202ENST00000370885 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
EXOSC1-202ENST00000370885 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
EXOSC1-202ENST00000370885 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
EXOSC1-202ENST00000370885 KRTAP5-7Q6L8G8 165 aa3.49□□□□□ -1.85
EXOSC1-202ENST00000370885 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
EXOSC1-202ENST00000370885 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
EXOSC1-202ENST00000370885 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
EXOSC1-202ENST00000370885 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
EXOSC1-202ENST00000370885 MT1AP04731 61 aa3.3□□□□□ -1.88
EXOSC1-202ENST00000370885 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
EXOSC1-202ENST00000370885 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
EXOSC1-202ENST00000370885 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
EXOSC1-202ENST00000370885 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
EXOSC1-202ENST00000370885 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
EXOSC1-202ENST00000370885 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
EXOSC1-202ENST00000370885 MT3P25713 68 aa3.05□□□□□ -1.92
EXOSC1-202ENST00000370885 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
EXOSC1-202ENST00000370885 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
EXOSC1-202ENST00000370885 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
EXOSC1-202ENST00000370885 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
EXOSC1-202ENST00000370885 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
EXOSC1-202ENST00000370885 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
EXOSC1-202ENST00000370885 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
EXOSC1-202ENST00000370885 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
EXOSC1-202ENST00000370885 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
EXOSC1-202ENST00000370885 PRM1P04553 51 aa2.37□□□□□ -2.03
EXOSC1-202ENST00000370885 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
EXOSC1-202ENST00000370885 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
EXOSC1-202ENST00000370885 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
EXOSC1-202ENST00000370885 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
EXOSC1-202ENST00000370885 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
EXOSC1-202ENST00000370885 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 85 ms