RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
CHUK-201ENST00000370397 CRCT1Q9UGL9 99 aa5.86□□□□□ -1.47
CHUK-201ENST00000370397 FSIP2Q5CZC0 6907 aa5.84□□□□□ -1.47
CHUK-201ENST00000370397 FCGBPQ9Y6R7 5405 aaPredicted RBP5.79□□□□□ -1.48
CHUK-201ENST00000370397 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.5
CHUK-201ENST00000370397 KRTAP9-6A0A140TA67 174 aa5.68□□□□□ -1.5
CHUK-201ENST00000370397 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
CHUK-201ENST00000370397 MT1GP13640 62 aa5.55□□□□□ -1.52
CHUK-201ENST00000370397 MUC12Q9UKN1 5478 aa5.55□□□□□ -1.52
CHUK-201ENST00000370397 MT1MQ8N339 61 aa5.52□□□□□ -1.53
CHUK-201ENST00000370397 MACF1Q9UPN3 7388 aaKnown RBP5.47□□□□□ -1.53
CHUK-201ENST00000370397 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.45□□□□□ -1.54
CHUK-201ENST00000370397 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
CHUK-201ENST00000370397 KRTAP19-3Q7Z4W3 81 aa5.44□□□□□ -1.54
CHUK-201ENST00000370397 KRTAP5-9P26371 169 aa5.38□□□□□ -1.55
CHUK-201ENST00000370397 KRTAP6-3Q3LI67 103 aa5.31□□□□□ -1.56
CHUK-201ENST00000370397 OBSCNQ5VST9 7968 aa5.31□□□□□ -1.56
CHUK-201ENST00000370397 LCE5AQ5TCM9 118 aa5.29□□□□□ -1.56
CHUK-201ENST00000370397 SYNE2Q8WXH0 6885 aaKnown RBP5.28□□□□□ -1.56
CHUK-201ENST00000370397 SPRR2FQ96RM1 72 aa5.27□□□□□ -1.57
CHUK-201ENST00000370397 DSTQ03001 7570 aaKnown RBP5.25□□□□□ -1.57
CHUK-201ENST00000370397 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.58
CHUK-201ENST00000370397 MT1AP04731 61 aa5.18□□□□□ -1.58
CHUK-201ENST00000370397 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
CHUK-201ENST00000370397 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
CHUK-201ENST00000370397 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
CHUK-201ENST00000370397 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
CHUK-201ENST00000370397 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
CHUK-201ENST00000370397 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
CHUK-201ENST00000370397 MDN1Q9NU22 5596 aa5.05□□□□□ -1.6
CHUK-201ENST00000370397 SPRR2EP22531 72 aa5.04□□□□□ -1.6
CHUK-201ENST00000370397 SPRR2BP35325 72 aa5.04□□□□□ -1.6
CHUK-201ENST00000370397 SPRR2AP35326 72 aa5.04□□□□□ -1.6
CHUK-201ENST00000370397 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
CHUK-201ENST00000370397 NEBP20929 6669 aa4.92□□□□□ -1.62
CHUK-201ENST00000370397 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
CHUK-201ENST00000370397 PRM1P04553 51 aa4.87□□□□□ -1.63
CHUK-201ENST00000370397 SPRR2DP22532 72 aa4.87□□□□□ -1.63
CHUK-201ENST00000370397 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
CHUK-201ENST00000370397 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
CHUK-201ENST00000370397 KRTAP20-1Q3LI63 56 aa4.58□□□□□ -1.68
CHUK-201ENST00000370397 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
CHUK-201ENST00000370397 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
CHUK-201ENST00000370397 MUC19Q7Z5P9 8384 aa4.38□□□□□ -1.71
CHUK-201ENST00000370397 LCE4AQ5TA78 99 aa4.38□□□□□ -1.71
CHUK-201ENST00000370397 MT3P25713 68 aa4.37□□□□□ -1.71
CHUK-201ENST00000370397 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
CHUK-201ENST00000370397 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
CHUK-201ENST00000370397 MT4P47944 62 aa4.19□□□□□ -1.74
CHUK-201ENST00000370397 KRTAP20-2Q3LI61 65 aa4.14□□□□□ -1.75
CHUK-201ENST00000370397 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
CHUK-201ENST00000370397 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
CHUK-201ENST00000370397 KRTAP5-3Q6L8H2 238 aa4.04□□□□□ -1.76
CHUK-201ENST00000370397 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
CHUK-201ENST00000370397 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
CHUK-201ENST00000370397 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
CHUK-201ENST00000370397 KRTAP5-10Q6L8G5 202 aa3.72□□□□□ -1.81
CHUK-201ENST00000370397 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
CHUK-201ENST00000370397 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.83
CHUK-201ENST00000370397 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
CHUK-201ENST00000370397 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
CHUK-201ENST00000370397 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
CHUK-201ENST00000370397 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
CHUK-201ENST00000370397 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
CHUK-201ENST00000370397 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
CHUK-201ENST00000370397 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
CHUK-201ENST00000370397 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
CHUK-201ENST00000370397 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
CHUK-201ENST00000370397 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
CHUK-201ENST00000370397 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
CHUK-201ENST00000370397 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
CHUK-201ENST00000370397 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
CHUK-201ENST00000370397 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
CHUK-201ENST00000370397 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
CHUK-201ENST00000370397 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
CHUK-201ENST00000370397 PHGR1C9JFL3 82 aa2.53□□□□□ -2
CHUK-201ENST00000370397 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 118.7 ms