RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 KRTAP4-3Q9BYR4 195 aa5.38□□□□□ -1.55
CHRNA4-201ENST00000370263 LCE2DQ5TA82 110 aaPredicted RBP5.37□□□□□ -1.55
CHRNA4-201ENST00000370263 KRTAP19-7Q3SYF9 63 aa5.34□□□□□ -1.55
CHRNA4-201ENST00000370263 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.56
CHRNA4-201ENST00000370263 BIRC6Q9NR09 4857 aa5.28□□□□□ -1.56
CHRNA4-201ENST00000370263 KRTAP19-6Q3LI70 58 aa5.23□□□□□ -1.57
CHRNA4-201ENST00000370263 MT4P47944 62 aa5.22□□□□□ -1.57
CHRNA4-201ENST00000370263 ABCA13Q86UQ4 5058 aa5.21□□□□□ -1.57
CHRNA4-201ENST00000370263 EPPK1P58107 5090 aaKnown RBP5.2□□□□□ -1.58
CHRNA4-201ENST00000370263 MT1AP04731 61 aa5.19□□□□□ -1.58
CHRNA4-201ENST00000370263 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
CHRNA4-201ENST00000370263 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
CHRNA4-201ENST00000370263 HMCN2Q8NDA2 5059 aa5.13□□□□□ -1.59
CHRNA4-201ENST00000370263 LCE1BQ5T7P3 118 aa5.11□□□□□ -1.59
CHRNA4-201ENST00000370263 UBR4Q5T4S7 5183 aa5.09□□□□□ -1.59
CHRNA4-201ENST00000370263 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
CHRNA4-201ENST00000370263 RNF213Q63HN8 5207 aa5□□□□□ -1.61
CHRNA4-201ENST00000370263 FAT4Q6V0I7 4981 aa4.99□□□□□ -1.61
CHRNA4-201ENST00000370263 KRTAP9-2Q9BYQ4 174 aa4.94□□□□□ -1.62
CHRNA4-201ENST00000370263 KRTAP6-2Q3LI66 62 aa4.93□□□□□ -1.62
CHRNA4-201ENST00000370263 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
CHRNA4-201ENST00000370263 LCE2AQ5TA79 106 aaPredicted RBP4.86□□□□□ -1.63
CHRNA4-201ENST00000370263 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
CHRNA4-201ENST00000370263 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
CHRNA4-201ENST00000370263 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
CHRNA4-201ENST00000370263 MUC2Q02817 5179 aa4.75□□□□□ -1.65
CHRNA4-201ENST00000370263 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
CHRNA4-201ENST00000370263 FSIP2Q5CZC0 6907 aa4.74□□□□□ -1.65
CHRNA4-201ENST00000370263 SYNE2Q8WXH0 6885 aaKnown RBP4.69□□□□□ -1.66
CHRNA4-201ENST00000370263 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
CHRNA4-201ENST00000370263 LCE1AQ5T7P2 110 aa4.62□□□□□ -1.67
CHRNA4-201ENST00000370263 KRTAP20-1Q3LI63 56 aa4.58□□□□□ -1.68
CHRNA4-201ENST00000370263 KRTAP2-2Q9BYT5 123 aa4.5□□□□□ -1.69
CHRNA4-201ENST00000370263 FCGBPQ9Y6R7 5405 aaPredicted RBP4.47□□□□□ -1.69
CHRNA4-201ENST00000370263 KRTAP6-3Q3LI67 103 aa4.42□□□□□ -1.7
CHRNA4-201ENST00000370263 USH2AO75445 5202 aa4.39□□□□□ -1.71
CHRNA4-201ENST00000370263 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
CHRNA4-201ENST00000370263 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
CHRNA4-201ENST00000370263 LCE1FQ5T754 118 aa4.38□□□□□ -1.71
CHRNA4-201ENST00000370263 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
CHRNA4-201ENST00000370263 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.24□□□□□ -1.73
CHRNA4-201ENST00000370263 KMT2DO14686 5537 aa4.19□□□□□ -1.74
CHRNA4-201ENST00000370263 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
CHRNA4-201ENST00000370263 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
CHRNA4-201ENST00000370263 SSPOA2VEC9 5147 aa3.97□□□□□ -1.77
CHRNA4-201ENST00000370263 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
CHRNA4-201ENST00000370263 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
CHRNA4-201ENST00000370263 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
CHRNA4-201ENST00000370263 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
CHRNA4-201ENST00000370263 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
CHRNA4-201ENST00000370263 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
CHRNA4-201ENST00000370263 NEBP20929 6669 aa3.77□□□□□ -1.81
CHRNA4-201ENST00000370263 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
CHRNA4-201ENST00000370263 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
CHRNA4-201ENST00000370263 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
CHRNA4-201ENST00000370263 MDN1Q9NU22 5596 aa3.53□□□□□ -1.85
CHRNA4-201ENST00000370263 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
CHRNA4-201ENST00000370263 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
CHRNA4-201ENST00000370263 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
CHRNA4-201ENST00000370263 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
CHRNA4-201ENST00000370263 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
CHRNA4-201ENST00000370263 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
CHRNA4-201ENST00000370263 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
CHRNA4-201ENST00000370263 KRTAP5-3Q6L8H2 238 aa2.95□□□□□ -1.94
CHRNA4-201ENST00000370263 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
CHRNA4-201ENST00000370263 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
CHRNA4-201ENST00000370263 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
CHRNA4-201ENST00000370263 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
CHRNA4-201ENST00000370263 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
CHRNA4-201ENST00000370263 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
CHRNA4-201ENST00000370263 PHGR1C9JFL3 82 aa2.55□□□□□ -2
CHRNA4-201ENST00000370263 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
CHRNA4-201ENST00000370263 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
CHRNA4-201ENST00000370263 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
CHRNA4-201ENST00000370263 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
CHRNA4-201ENST00000370263 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
CHRNA4-201ENST00000370263 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 68.3 ms