RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
RTCA-203ENST00000370128 KRTAP9-2Q9BYQ4 174 aa5.76□□□□□ -1.49
RTCA-203ENST00000370128 FCGBPQ9Y6R7 5405 aaPredicted RBP5.76□□□□□ -1.49
RTCA-203ENST00000370128 KRTAP12-4P60329 112 aa5.68□□□□□ -1.5
RTCA-203ENST00000370128 KRTAP4-3Q9BYR4 195 aa5.65□□□□□ -1.51
RTCA-203ENST00000370128 MUC12Q9UKN1 5478 aa5.62□□□□□ -1.51
RTCA-203ENST00000370128 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
RTCA-203ENST00000370128 KRTAP19-3Q7Z4W3 81 aa5.6□□□□□ -1.51
RTCA-203ENST00000370128 MT1MQ8N339 61 aa5.59□□□□□ -1.51
RTCA-203ENST00000370128 MT1GP13640 62 aa5.58□□□□□ -1.52
RTCA-203ENST00000370128 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
RTCA-203ENST00000370128 MACF1Q9UPN3 7388 aaKnown RBP5.52□□□□□ -1.53
RTCA-203ENST00000370128 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
RTCA-203ENST00000370128 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
RTCA-203ENST00000370128 KRTAP2-2Q9BYT5 123 aa5.42□□□□□ -1.54
RTCA-203ENST00000370128 SYNE2Q8WXH0 6885 aaKnown RBP5.39□□□□□ -1.55
RTCA-203ENST00000370128 DSTQ03001 7570 aaKnown RBP5.39□□□□□ -1.55
RTCA-203ENST00000370128 KRTAP6-3Q3LI67 103 aa5.35□□□□□ -1.55
RTCA-203ENST00000370128 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
RTCA-203ENST00000370128 LCE1AQ5T7P2 110 aa5.25□□□□□ -1.57
RTCA-203ENST00000370128 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
RTCA-203ENST00000370128 PRM1P04553 51 aa5.16□□□□□ -1.58
RTCA-203ENST00000370128 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.14□□□□□ -1.59
RTCA-203ENST00000370128 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
RTCA-203ENST00000370128 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
RTCA-203ENST00000370128 KRTAP9-7A8MTY7 169 aa5.09□□□□□ -1.59
RTCA-203ENST00000370128 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
RTCA-203ENST00000370128 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
RTCA-203ENST00000370128 MT1AP04731 61 aa5.01□□□□□ -1.61
RTCA-203ENST00000370128 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
RTCA-203ENST00000370128 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
RTCA-203ENST00000370128 SPRR2EP22531 72 aa4.94□□□□□ -1.62
RTCA-203ENST00000370128 SPRR2BP35325 72 aa4.94□□□□□ -1.62
RTCA-203ENST00000370128 SPRR2AP35326 72 aa4.94□□□□□ -1.62
RTCA-203ENST00000370128 LCE1EQ5T753 118 aa4.92□□□□□ -1.62
RTCA-203ENST00000370128 KRTAP4-6Q9BYQ5 205 aa4.92□□□□□ -1.62
RTCA-203ENST00000370128 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
RTCA-203ENST00000370128 LCE3DQ9BYE3 92 aa4.87□□□□□ -1.63
RTCA-203ENST00000370128 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
RTCA-203ENST00000370128 SPRR2DP22532 72 aa4.73□□□□□ -1.65
RTCA-203ENST00000370128 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
RTCA-203ENST00000370128 NEBP20929 6669 aa4.72□□□□□ -1.65
RTCA-203ENST00000370128 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
RTCA-203ENST00000370128 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
RTCA-203ENST00000370128 MT3P25713 68 aa4.5□□□□□ -1.69
RTCA-203ENST00000370128 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
RTCA-203ENST00000370128 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
RTCA-203ENST00000370128 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.7
RTCA-203ENST00000370128 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
RTCA-203ENST00000370128 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
RTCA-203ENST00000370128 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
RTCA-203ENST00000370128 MT4P47944 62 aa4.17□□□□□ -1.74
RTCA-203ENST00000370128 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
RTCA-203ENST00000370128 HMCN1Q96RW7 5635 aa4.11□□□□□ -1.75
RTCA-203ENST00000370128 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
RTCA-203ENST00000370128 KRTAP5-3Q6L8H2 238 aa3.94□□□□□ -1.78
RTCA-203ENST00000370128 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
RTCA-203ENST00000370128 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
RTCA-203ENST00000370128 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
RTCA-203ENST00000370128 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
RTCA-203ENST00000370128 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
RTCA-203ENST00000370128 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
RTCA-203ENST00000370128 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
RTCA-203ENST00000370128 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
RTCA-203ENST00000370128 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
RTCA-203ENST00000370128 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
RTCA-203ENST00000370128 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
RTCA-203ENST00000370128 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
RTCA-203ENST00000370128 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
RTCA-203ENST00000370128 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
RTCA-203ENST00000370128 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
RTCA-203ENST00000370128 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
RTCA-203ENST00000370128 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
RTCA-203ENST00000370128 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
RTCA-203ENST00000370128 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
RTCA-203ENST00000370128 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
RTCA-203ENST00000370128 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 7.4 ms