RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
SSR4-202ENST00000370085 PP632Q6XCG6 107 aa4.97□□□□□ -1.61
SSR4-202ENST00000370085 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
SSR4-202ENST00000370085 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
SSR4-202ENST00000370085 BRK1Q8WUW1 75 aa4.95□□□□□ -1.62
SSR4-202ENST00000370085 MT1GP13640 62 aa4.94□□□□□ -1.62
SSR4-202ENST00000370085 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
SSR4-202ENST00000370085 MT1LQ93083 61 aa4.91□□□□□ -1.62
SSR4-202ENST00000370085 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
SSR4-202ENST00000370085 KRTAP2-1Q9BYU5 128 aa4.89□□□□□ -1.63
SSR4-202ENST00000370085 MT1MQ8N339 61 aa4.82□□□□□ -1.64
SSR4-202ENST00000370085 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
SSR4-202ENST00000370085 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
SSR4-202ENST00000370085 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
SSR4-202ENST00000370085 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
SSR4-202ENST00000370085 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
SSR4-202ENST00000370085 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
SSR4-202ENST00000370085 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
SSR4-202ENST00000370085 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
SSR4-202ENST00000370085 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
SSR4-202ENST00000370085 KRTAP4-9Q9BYQ8 210 aa4.44□□□□□ -1.7
SSR4-202ENST00000370085 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
SSR4-202ENST00000370085 KRTAP5-4Q6L8H1 288 aa4.42□□□□□ -1.7
SSR4-202ENST00000370085 MT4P47944 62 aa4.39□□□□□ -1.71
SSR4-202ENST00000370085 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
SSR4-202ENST00000370085 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
SSR4-202ENST00000370085 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
SSR4-202ENST00000370085 PRAC1Q96KF2 57 aa4.35□□□□□ -1.71
SSR4-202ENST00000370085 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
SSR4-202ENST00000370085 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
SSR4-202ENST00000370085 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
SSR4-202ENST00000370085 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
SSR4-202ENST00000370085 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
SSR4-202ENST00000370085 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
SSR4-202ENST00000370085 MT1AP04731 61 aa4.19□□□□□ -1.74
SSR4-202ENST00000370085 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
SSR4-202ENST00000370085 SVIPQ8NHG7 77 aa4.13□□□□□ -1.75
SSR4-202ENST00000370085 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
SSR4-202ENST00000370085 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
SSR4-202ENST00000370085 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
SSR4-202ENST00000370085 KRTAP5-3Q6L8H2 238 aa4.01□□□□□ -1.77
SSR4-202ENST00000370085 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
SSR4-202ENST00000370085 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
SSR4-202ENST00000370085 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
SSR4-202ENST00000370085 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
SSR4-202ENST00000370085 MT3P25713 68 aa3.87□□□□□ -1.79
SSR4-202ENST00000370085 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
SSR4-202ENST00000370085 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
SSR4-202ENST00000370085 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
SSR4-202ENST00000370085 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
SSR4-202ENST00000370085 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
SSR4-202ENST00000370085 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
SSR4-202ENST00000370085 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
SSR4-202ENST00000370085 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
SSR4-202ENST00000370085 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
SSR4-202ENST00000370085 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
SSR4-202ENST00000370085 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
SSR4-202ENST00000370085 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
SSR4-202ENST00000370085 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
SSR4-202ENST00000370085 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
SSR4-202ENST00000370085 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
SSR4-202ENST00000370085 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
SSR4-202ENST00000370085 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
SSR4-202ENST00000370085 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
SSR4-202ENST00000370085 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
SSR4-202ENST00000370085 A0A0A0MQY5 61 aa2.79□□□□□ -1.96
SSR4-202ENST00000370085 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
SSR4-202ENST00000370085 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
SSR4-202ENST00000370085 INE1O15225 51 aa2.7□□□□□ -1.98
SSR4-202ENST00000370085 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
SSR4-202ENST00000370085 PRM1P04553 51 aa2.56□□□□□ -2
SSR4-202ENST00000370085 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
SSR4-202ENST00000370085 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
SSR4-202ENST00000370085 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
SSR4-202ENST00000370085 H3BS24 57 aa1.97□□□□□ -2.09
SSR4-202ENST00000370085 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
SSR4-202ENST00000370085 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 95.9 ms