RNA–Protein interactions for RNA: ENST00000369905.8

ACTR1A-201, Transcript of ARP1 actin related protein 1 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR1A, Length 2,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1A-201ENST00000369905 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
ACTR1A-201ENST00000369905 MUC12Q9UKN1 5478 aa4.07□□□□□ -1.76
ACTR1A-201ENST00000369905 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
ACTR1A-201ENST00000369905 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
ACTR1A-201ENST00000369905 MT1GP13640 62 aa3.96□□□□□ -1.78
ACTR1A-201ENST00000369905 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
ACTR1A-201ENST00000369905 KRTAP19-6Q3LI70 58 aa3.93□□□□□ -1.78
ACTR1A-201ENST00000369905 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
ACTR1A-201ENST00000369905 MT1MQ8N339 61 aa3.85□□□□□ -1.79
ACTR1A-201ENST00000369905 KRTAP9-2Q9BYQ4 174 aa3.85□□□□□ -1.79
ACTR1A-201ENST00000369905 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
ACTR1A-201ENST00000369905 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
ACTR1A-201ENST00000369905 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
ACTR1A-201ENST00000369905 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
ACTR1A-201ENST00000369905 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
ACTR1A-201ENST00000369905 SPRR2FQ96RM1 72 aa3.71□□□□□ -1.82
ACTR1A-201ENST00000369905 KRTAP4-9Q9BYQ8 210 aa3.71□□□□□ -1.82
ACTR1A-201ENST00000369905 LCE3BQ5TA77 95 aa3.69□□□□□ -1.82
ACTR1A-201ENST00000369905 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
ACTR1A-201ENST00000369905 MDN1Q9NU22 5596 aa3.63□□□□□ -1.83
ACTR1A-201ENST00000369905 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
ACTR1A-201ENST00000369905 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
ACTR1A-201ENST00000369905 KRTAP9-6A0A140TA67 174 aa3.48□□□□□ -1.85
ACTR1A-201ENST00000369905 MT1AP04731 61 aa3.42□□□□□ -1.86
ACTR1A-201ENST00000369905 KRTAP9-7A8MTY7 169 aa3.42□□□□□ -1.86
ACTR1A-201ENST00000369905 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
ACTR1A-201ENST00000369905 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
ACTR1A-201ENST00000369905 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
ACTR1A-201ENST00000369905 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
ACTR1A-201ENST00000369905 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
ACTR1A-201ENST00000369905 PRM1P04553 51 aa3.32□□□□□ -1.88
ACTR1A-201ENST00000369905 SPRR2EP22531 72 aa3.32□□□□□ -1.88
ACTR1A-201ENST00000369905 SPRR2BP35325 72 aa3.32□□□□□ -1.88
ACTR1A-201ENST00000369905 SPRR2AP35326 72 aa3.32□□□□□ -1.88
ACTR1A-201ENST00000369905 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
ACTR1A-201ENST00000369905 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
ACTR1A-201ENST00000369905 KRTAP9-4Q9BYQ2 154 aa3.29□□□□□ -1.88
ACTR1A-201ENST00000369905 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
ACTR1A-201ENST00000369905 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
ACTR1A-201ENST00000369905 SPRR2DP22532 72 aa3.17□□□□□ -1.9
ACTR1A-201ENST00000369905 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
ACTR1A-201ENST00000369905 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
ACTR1A-201ENST00000369905 NEBP20929 6669 aa3.13□□□□□ -1.91
ACTR1A-201ENST00000369905 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
ACTR1A-201ENST00000369905 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
ACTR1A-201ENST00000369905 MT3P25713 68 aa3.06□□□□□ -1.92
ACTR1A-201ENST00000369905 LCE1DQ5T752 114 aa3□□□□□ -1.93
ACTR1A-201ENST00000369905 KRTAP4-6Q9BYQ5 205 aa2.92□□□□□ -1.94
ACTR1A-201ENST00000369905 MT4P47944 62 aa2.88□□□□□ -1.95
ACTR1A-201ENST00000369905 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
ACTR1A-201ENST00000369905 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
ACTR1A-201ENST00000369905 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
ACTR1A-201ENST00000369905 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
ACTR1A-201ENST00000369905 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
ACTR1A-201ENST00000369905 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
ACTR1A-201ENST00000369905 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
ACTR1A-201ENST00000369905 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
ACTR1A-201ENST00000369905 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
ACTR1A-201ENST00000369905 KRTAP4-11Q9BYQ6 195 aa2.55□□□□□ -2
ACTR1A-201ENST00000369905 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
ACTR1A-201ENST00000369905 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
ACTR1A-201ENST00000369905 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
ACTR1A-201ENST00000369905 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
ACTR1A-201ENST00000369905 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
ACTR1A-201ENST00000369905 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
ACTR1A-201ENST00000369905 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
ACTR1A-201ENST00000369905 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
ACTR1A-201ENST00000369905 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
ACTR1A-201ENST00000369905 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
ACTR1A-201ENST00000369905 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
ACTR1A-201ENST00000369905 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
ACTR1A-201ENST00000369905 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
ACTR1A-201ENST00000369905 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
ACTR1A-201ENST00000369905 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
ACTR1A-201ENST00000369905 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
ACTR1A-201ENST00000369905 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
ACTR1A-201ENST00000369905 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 9.2 ms