RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
BRCC3-203ENST00000369459 USH2AO75445 5202 aa2.98□□□□□ -1.93
BRCC3-203ENST00000369459 LCE1AQ5T7P2 110 aa2.94□□□□□ -1.94
BRCC3-203ENST00000369459 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
BRCC3-203ENST00000369459 MT1XP80297 61 aa2.92□□□□□ -1.94
BRCC3-203ENST00000369459 KRTAP10-5P60370 271 aa2.92□□□□□ -1.94
BRCC3-203ENST00000369459 KRTAP19-6Q3LI70 58 aa2.91□□□□□ -1.94
BRCC3-203ENST00000369459 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
BRCC3-203ENST00000369459 TNP1P09430 55 aa2.9□□□□□ -1.95
BRCC3-203ENST00000369459 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
BRCC3-203ENST00000369459 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
BRCC3-203ENST00000369459 KRTAP10-12P60413 245 aa2.82□□□□□ -1.96
BRCC3-203ENST00000369459 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
BRCC3-203ENST00000369459 KRTAP2-3P0C7H8 128 aa2.79□□□□□ -1.96
BRCC3-203ENST00000369459 KRTAP2-4Q9BYR9 128 aa2.79□□□□□ -1.96
BRCC3-203ENST00000369459 KRTAP10-7P60409 375 aaPredicted RBP2.76□□□□□ -1.97
BRCC3-203ENST00000369459 KRTAP8-1Q8IUC2 63 aa2.74□□□□□ -1.97
BRCC3-203ENST00000369459 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
BRCC3-203ENST00000369459 KRTAP12-4P60329 112 aa2.72□□□□□ -1.97
BRCC3-203ENST00000369459 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
BRCC3-203ENST00000369459 NEBP20929 6669 aa2.69□□□□□ -1.98
BRCC3-203ENST00000369459 KMT2DO14686 5537 aa2.68□□□□□ -1.98
BRCC3-203ENST00000369459 SYNE2Q8WXH0 6885 aaKnown RBP2.66□□□□□ -1.98
BRCC3-203ENST00000369459 KRTAP5-9P26371 169 aa2.65□□□□□ -1.99
BRCC3-203ENST00000369459 KRTAP12-3P60328 96 aa2.65□□□□□ -1.99
BRCC3-203ENST00000369459 KRTAP2-1Q9BYU5 128 aa2.64□□□□□ -1.99
BRCC3-203ENST00000369459 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
BRCC3-203ENST00000369459 FCGBPQ9Y6R7 5405 aaPredicted RBP2.63□□□□□ -1.99
BRCC3-203ENST00000369459 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
BRCC3-203ENST00000369459 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
BRCC3-203ENST00000369459 MACF1Q9UPN3 7388 aaKnown RBP2.61□□□□□ -1.99
BRCC3-203ENST00000369459 KRTAP19-7Q3SYF9 63 aa2.61□□□□□ -1.99
BRCC3-203ENST00000369459 MT1EP04732 61 aa2.57□□□□□ -2
BRCC3-203ENST00000369459 MT1LQ93083 61 aa2.52□□□□□ -2.01
BRCC3-203ENST00000369459 MUC12Q9UKN1 5478 aa2.51□□□□□ -2.01
BRCC3-203ENST00000369459 SPRR2FQ96RM1 72 aa2.5□□□□□ -2.01
BRCC3-203ENST00000369459 MT1GP13640 62 aa2.5□□□□□ -2.01
BRCC3-203ENST00000369459 KRTAP19-3Q7Z4W3 81 aa2.49□□□□□ -2.01
BRCC3-203ENST00000369459 MT3P25713 68 aa2.46□□□□□ -2.02
BRCC3-203ENST00000369459 MDN1Q9NU22 5596 aa2.46□□□□□ -2.02
BRCC3-203ENST00000369459 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
BRCC3-203ENST00000369459 MT1MQ8N339 61 aa2.43□□□□□ -2.02
BRCC3-203ENST00000369459 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
BRCC3-203ENST00000369459 DSTQ03001 7570 aaKnown RBP2.42□□□□□ -2.02
BRCC3-203ENST00000369459 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
BRCC3-203ENST00000369459 SPRR2EP22531 72 aa2.4□□□□□ -2.03
BRCC3-203ENST00000369459 SPRR2BP35325 72 aa2.4□□□□□ -2.03
BRCC3-203ENST00000369459 SPRR2AP35326 72 aa2.4□□□□□ -2.03
BRCC3-203ENST00000369459 KRTAP5-4Q6L8H1 288 aa2.33□□□□□ -2.04
BRCC3-203ENST00000369459 SPRR2DP22532 72 aa2.32□□□□□ -2.04
BRCC3-203ENST00000369459 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
BRCC3-203ENST00000369459 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
BRCC3-203ENST00000369459 KRTAP9-6A8MVA2 160 aa2.28□□□□□ -2.04
BRCC3-203ENST00000369459 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
BRCC3-203ENST00000369459 PRM1P04553 51 aa2.27□□□□□ -2.05
BRCC3-203ENST00000369459 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
BRCC3-203ENST00000369459 MT1AP04731 61 aa2.18□□□□□ -2.06
BRCC3-203ENST00000369459 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
BRCC3-203ENST00000369459 SYNE1Q8NF91 8797 aaKnown RBP2.14□□□□□ -2.07
BRCC3-203ENST00000369459 OBSCNQ5VST9 7968 aa2.13□□□□□ -2.07
BRCC3-203ENST00000369459 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
BRCC3-203ENST00000369459 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
BRCC3-203ENST00000369459 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.08
BRCC3-203ENST00000369459 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.08
BRCC3-203ENST00000369459 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
BRCC3-203ENST00000369459 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
BRCC3-203ENST00000369459 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
BRCC3-203ENST00000369459 MT4P47944 62 aa1.95□□□□□ -2.1
BRCC3-203ENST00000369459 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
BRCC3-203ENST00000369459 KRTAP6-2Q3LI66 62 aa1.92□□□□□ -2.1
BRCC3-203ENST00000369459 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
BRCC3-203ENST00000369459 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
BRCC3-203ENST00000369459 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
BRCC3-203ENST00000369459 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
BRCC3-203ENST00000369459 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
BRCC3-203ENST00000369459 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
BRCC3-203ENST00000369459 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 359.6 ms