RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 KRTAP19-7Q3SYF9 63 aa6.01□□□□□ -1.45
CHTOP-203ENST00000368690 MACF1Q9UPN3 7388 aaKnown RBP5.93□□□□□ -1.46
CHTOP-203ENST00000368690 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.47
CHTOP-203ENST00000368690 MT1LQ93083 61 aa5.88□□□□□ -1.47
CHTOP-203ENST00000368690 KRTAP9-6A0A140TA67 174 aa5.82□□□□□ -1.48
CHTOP-203ENST00000368690 MT1EP04732 61 aa5.82□□□□□ -1.48
CHTOP-203ENST00000368690 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
CHTOP-203ENST00000368690 SPRR2FQ96RM1 72 aa5.73□□□□□ -1.49
CHTOP-203ENST00000368690 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
CHTOP-203ENST00000368690 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.64□□□□□ -1.51
CHTOP-203ENST00000368690 KRTAP5-9P26371 169 aa5.54□□□□□ -1.52
CHTOP-203ENST00000368690 KRTAP19-3Q7Z4W3 81 aa5.53□□□□□ -1.52
CHTOP-203ENST00000368690 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
CHTOP-203ENST00000368690 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
CHTOP-203ENST00000368690 MT1GP13640 62 aa5.46□□□□□ -1.53
CHTOP-203ENST00000368690 MDN1Q9NU22 5596 aa5.46□□□□□ -1.54
CHTOP-203ENST00000368690 KRTAP6-3Q3LI67 103 aa5.45□□□□□ -1.54
CHTOP-203ENST00000368690 SPRR2EP22531 72 aa5.42□□□□□ -1.54
CHTOP-203ENST00000368690 SPRR2BP35325 72 aa5.42□□□□□ -1.54
CHTOP-203ENST00000368690 SPRR2AP35326 72 aa5.42□□□□□ -1.54
CHTOP-203ENST00000368690 MT1MQ8N339 61 aa5.42□□□□□ -1.54
CHTOP-203ENST00000368690 KRTAP4-3Q9BYR4 195 aa5.42□□□□□ -1.54
CHTOP-203ENST00000368690 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
CHTOP-203ENST00000368690 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.55
CHTOP-203ENST00000368690 DSTQ03001 7570 aaKnown RBP5.35□□□□□ -1.55
CHTOP-203ENST00000368690 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
CHTOP-203ENST00000368690 MT1AP04731 61 aa5.23□□□□□ -1.57
CHTOP-203ENST00000368690 SPRR2DP22532 72 aa5.22□□□□□ -1.57
CHTOP-203ENST00000368690 LCE3BQ5TA77 95 aa5.12□□□□□ -1.59
CHTOP-203ENST00000368690 NEBP20929 6669 aa5.1□□□□□ -1.59
CHTOP-203ENST00000368690 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
CHTOP-203ENST00000368690 LCE3DQ9BYE3 92 aa5.02□□□□□ -1.61
CHTOP-203ENST00000368690 LCE3EQ5T5B0 92 aa5.01□□□□□ -1.61
CHTOP-203ENST00000368690 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
CHTOP-203ENST00000368690 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
CHTOP-203ENST00000368690 PRM1P04553 51 aa4.9□□□□□ -1.62
CHTOP-203ENST00000368690 SYNE1Q8NF91 8797 aaKnown RBP4.81□□□□□ -1.64
CHTOP-203ENST00000368690 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
CHTOP-203ENST00000368690 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
CHTOP-203ENST00000368690 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
CHTOP-203ENST00000368690 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
CHTOP-203ENST00000368690 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
CHTOP-203ENST00000368690 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
CHTOP-203ENST00000368690 MT4P47944 62 aa4.58□□□□□ -1.68
CHTOP-203ENST00000368690 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
CHTOP-203ENST00000368690 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
CHTOP-203ENST00000368690 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
CHTOP-203ENST00000368690 MT3P25713 68 aa4.43□□□□□ -1.7
CHTOP-203ENST00000368690 HMCN1Q96RW7 5635 aa4.37□□□□□ -1.71
CHTOP-203ENST00000368690 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
CHTOP-203ENST00000368690 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
CHTOP-203ENST00000368690 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
CHTOP-203ENST00000368690 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
CHTOP-203ENST00000368690 KRTAP5-2Q701N4 177 aa4.16□□□□□ -1.74
CHTOP-203ENST00000368690 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
CHTOP-203ENST00000368690 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.81
CHTOP-203ENST00000368690 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.81
CHTOP-203ENST00000368690 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
CHTOP-203ENST00000368690 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
CHTOP-203ENST00000368690 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
CHTOP-203ENST00000368690 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
CHTOP-203ENST00000368690 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
CHTOP-203ENST00000368690 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
CHTOP-203ENST00000368690 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
CHTOP-203ENST00000368690 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
CHTOP-203ENST00000368690 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
CHTOP-203ENST00000368690 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
CHTOP-203ENST00000368690 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
CHTOP-203ENST00000368690 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
CHTOP-203ENST00000368690 KRTAP21-1Q3LI58 79 aa3.21□□□□□ -1.9
CHTOP-203ENST00000368690 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
CHTOP-203ENST00000368690 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
CHTOP-203ENST00000368690 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
CHTOP-203ENST00000368690 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
CHTOP-203ENST00000368690 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
CHTOP-203ENST00000368690 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
CHTOP-203ENST00000368690 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms