RNA–Protein interactions for RNA: ENST00000368449.8

SHC1-203, Transcript of SHC adaptor protein 1, humanhuman

TSL 5 BASIC

Gene SHC1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-203ENST00000368449 MT1EP04732 61 aa4.31□□□□□ -1.72
SHC1-203ENST00000368449 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.2□□□□□ -1.74
SHC1-203ENST00000368449 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
SHC1-203ENST00000368449 KRTAP19-6Q3LI70 58 aa4.17□□□□□ -1.74
SHC1-203ENST00000368449 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
SHC1-203ENST00000368449 KRTAP9-2Q9BYQ4 174 aa4.17□□□□□ -1.74
SHC1-203ENST00000368449 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
SHC1-203ENST00000368449 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
SHC1-203ENST00000368449 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
SHC1-203ENST00000368449 MT1GP13640 62 aa4.08□□□□□ -1.76
SHC1-203ENST00000368449 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
SHC1-203ENST00000368449 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
SHC1-203ENST00000368449 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
SHC1-203ENST00000368449 LCE3BQ5TA77 95 aa4.03□□□□□ -1.76
SHC1-203ENST00000368449 MT1MQ8N339 61 aa4.02□□□□□ -1.77
SHC1-203ENST00000368449 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
SHC1-203ENST00000368449 CRCT1Q9UGL9 99 aa4□□□□□ -1.77
SHC1-203ENST00000368449 KRTAP19-3Q7Z4W3 81 aa3.99□□□□□ -1.77
SHC1-203ENST00000368449 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
SHC1-203ENST00000368449 DSTQ03001 7570 aaKnown RBP3.98□□□□□ -1.77
SHC1-203ENST00000368449 KRTAP9-9Q9BYP9 154 aa3.97□□□□□ -1.77
SHC1-203ENST00000368449 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
SHC1-203ENST00000368449 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
SHC1-203ENST00000368449 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
SHC1-203ENST00000368449 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
SHC1-203ENST00000368449 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
SHC1-203ENST00000368449 KRTAP4-9Q9BYQ8 210 aa3.78□□□□□ -1.8
SHC1-203ENST00000368449 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
SHC1-203ENST00000368449 LCE1DQ5T752 114 aa3.71□□□□□ -1.82
SHC1-203ENST00000368449 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
SHC1-203ENST00000368449 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
SHC1-203ENST00000368449 MT1AP04731 61 aa3.61□□□□□ -1.83
SHC1-203ENST00000368449 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
SHC1-203ENST00000368449 SPRR2EP22531 72 aa3.6□□□□□ -1.83
SHC1-203ENST00000368449 SPRR2BP35325 72 aa3.6□□□□□ -1.83
SHC1-203ENST00000368449 SPRR2AP35326 72 aa3.6□□□□□ -1.83
SHC1-203ENST00000368449 PRM1P04553 51 aa3.57□□□□□ -1.84
SHC1-203ENST00000368449 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
SHC1-203ENST00000368449 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
SHC1-203ENST00000368449 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
SHC1-203ENST00000368449 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.85
SHC1-203ENST00000368449 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
SHC1-203ENST00000368449 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
SHC1-203ENST00000368449 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
SHC1-203ENST00000368449 SPRR2DP22532 72 aa3.45□□□□□ -1.86
SHC1-203ENST00000368449 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
SHC1-203ENST00000368449 NEBP20929 6669 aa3.4□□□□□ -1.87
SHC1-203ENST00000368449 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
SHC1-203ENST00000368449 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
SHC1-203ENST00000368449 MT3P25713 68 aa3.21□□□□□ -1.9
SHC1-203ENST00000368449 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
SHC1-203ENST00000368449 MT4P47944 62 aa3.08□□□□□ -1.92
SHC1-203ENST00000368449 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
SHC1-203ENST00000368449 KRTAP20-1Q3LI63 56 aa3.04□□□□□ -1.92
SHC1-203ENST00000368449 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
SHC1-203ENST00000368449 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
SHC1-203ENST00000368449 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
SHC1-203ENST00000368449 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
SHC1-203ENST00000368449 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
SHC1-203ENST00000368449 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
SHC1-203ENST00000368449 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
SHC1-203ENST00000368449 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
SHC1-203ENST00000368449 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
SHC1-203ENST00000368449 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
SHC1-203ENST00000368449 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
SHC1-203ENST00000368449 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
SHC1-203ENST00000368449 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
SHC1-203ENST00000368449 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
SHC1-203ENST00000368449 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
SHC1-203ENST00000368449 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
SHC1-203ENST00000368449 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
SHC1-203ENST00000368449 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
SHC1-203ENST00000368449 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
SHC1-203ENST00000368449 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
SHC1-203ENST00000368449 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
SHC1-203ENST00000368449 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
SHC1-203ENST00000368449 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 139.1 ms