RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 LCE1AQ5T7P2 110 aa7.08□□□□□ -1.28
LMNA-204ENST00000368298 KRTAP2-3P0C7H8 128 aa7.04□□□□□ -1.28
LMNA-204ENST00000368298 KRTAP2-4Q9BYR9 128 aa7.04□□□□□ -1.28
LMNA-204ENST00000368298 KRTAP19-7Q3SYF9 63 aa7.01□□□□□ -1.29
LMNA-204ENST00000368298 LCE3AQ5TA76 89 aa6.96□□□□□ -1.3
LMNA-204ENST00000368298 MT1EP04732 61 aa6.92□□□□□ -1.3
LMNA-204ENST00000368298 SPRR2DP22532 72 aa6.9□□□□□ -1.31
LMNA-204ENST00000368298 KRTAP19-5Q3LI72 72 aa6.89□□□□□ -1.31
LMNA-204ENST00000368298 KRTAP2-2Q9BYT5 123 aa6.82□□□□□ -1.32
LMNA-204ENST00000368298 KRTAP2-1Q9BYU5 128 aa6.82□□□□□ -1.32
LMNA-204ENST00000368298 KRTAP19-3Q7Z4W3 81 aa6.79□□□□□ -1.32
LMNA-204ENST00000368298 LCE5AQ5TCM9 118 aa6.79□□□□□ -1.32
LMNA-204ENST00000368298 KRTAP15-1Q3LI76 137 aa6.73□□□□□ -1.33
LMNA-204ENST00000368298 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
LMNA-204ENST00000368298 MT1GP13640 62 aa6.7□□□□□ -1.34
LMNA-204ENST00000368298 MT1LQ93083 61 aa6.67□□□□□ -1.34
LMNA-204ENST00000368298 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
LMNA-204ENST00000368298 MT1MQ8N339 61 aa6.55□□□□□ -1.36
LMNA-204ENST00000368298 DSTQ03001 7570 aaKnown RBP6.49□□□□□ -1.37
LMNA-204ENST00000368298 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
LMNA-204ENST00000368298 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
LMNA-204ENST00000368298 KRTAP4-3Q9BYR4 195 aa6.36□□□□□ -1.39
LMNA-204ENST00000368298 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.4
LMNA-204ENST00000368298 NDUFAF8A1L188 74 aa6.28□□□□□ -1.4
LMNA-204ENST00000368298 LUZP6Q538Z0 58 aa6.28□□□□□ -1.4
LMNA-204ENST00000368298 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.41
LMNA-204ENST00000368298 LCE3CQ5T5A8 94 aa6.23□□□□□ -1.41
LMNA-204ENST00000368298 LCE1DQ5T752 114 aa6.12□□□□□ -1.43
LMNA-204ENST00000368298 LCE4AQ5TA78 99 aa6.11□□□□□ -1.43
LMNA-204ENST00000368298 KRTAP5-4Q6L8H1 288 aa6.1□□□□□ -1.43
LMNA-204ENST00000368298 GPR98Q8WXG9 6306 aa6.05□□□□□ -1.44
LMNA-204ENST00000368298 MT4P47944 62 aa6.05□□□□□ -1.44
LMNA-204ENST00000368298 KRTAP5-5Q701N2 237 aaPredicted RBP6.02□□□□□ -1.45
LMNA-204ENST00000368298 HMCN1Q96RW7 5635 aa5.99□□□□□ -1.45
LMNA-204ENST00000368298 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
LMNA-204ENST00000368298 KRTAP9-6A8MVA2 160 aa5.9□□□□□ -1.46
LMNA-204ENST00000368298 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.46
LMNA-204ENST00000368298 AHNAK2Q8IVF2 5795 aa5.81□□□□□ -1.48
LMNA-204ENST00000368298 H3BS24 57 aa5.8□□□□□ -1.48
LMNA-204ENST00000368298 KRTAP12-4P60329 112 aa5.74□□□□□ -1.49
LMNA-204ENST00000368298 KRTAP20-2Q3LI61 65 aa5.7□□□□□ -1.5
LMNA-204ENST00000368298 MT1AP04731 61 aa5.69□□□□□ -1.5
LMNA-204ENST00000368298 KRTAP5-10Q6L8G5 202 aa5.68□□□□□ -1.5
LMNA-204ENST00000368298 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
LMNA-204ENST00000368298 KRTAP6-1Q3LI64 71 aa5.62□□□□□ -1.51
LMNA-204ENST00000368298 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
LMNA-204ENST00000368298 A0A0A0MQY5 61 aa5.55□□□□□ -1.52
LMNA-204ENST00000368298 KRTAP9-4Q9BYQ2 154 aa5.47□□□□□ -1.53
LMNA-204ENST00000368298 KRTAP5-7Q6L8G8 165 aa5.44□□□□□ -1.54
LMNA-204ENST00000368298 KRTAP5-2Q701N4 177 aa5.4□□□□□ -1.54
LMNA-204ENST00000368298 KRTAP6-2Q3LI66 62 aa5.29□□□□□ -1.56
LMNA-204ENST00000368298 MT3P25713 68 aa5.19□□□□□ -1.58
LMNA-204ENST00000368298 INE1O15225 51 aa5.17□□□□□ -1.58
LMNA-204ENST00000368298 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
LMNA-204ENST00000368298 KRTAP5-8O75690 187 aa5□□□□□ -1.61
LMNA-204ENST00000368298 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
LMNA-204ENST00000368298 KRTAP5-1Q6L8H4 278 aa4.77□□□□□ -1.65
LMNA-204ENST00000368298 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
LMNA-204ENST00000368298 AHNAKQ09666 5890 aaKnown RBP4.73□□□□□ -1.65
LMNA-204ENST00000368298 MUC5ACP98088 5654 aa4.73□□□□□ -1.65
LMNA-204ENST00000368298 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
LMNA-204ENST00000368298 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
LMNA-204ENST00000368298 LCE3DQ9BYE3 92 aa4.69□□□□□ -1.66
LMNA-204ENST00000368298 LCE3EQ5T5B0 92 aa4.6□□□□□ -1.67
LMNA-204ENST00000368298 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
LMNA-204ENST00000368298 LCE1CQ5T751 118 aa4.37□□□□□ -1.71
LMNA-204ENST00000368298 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
LMNA-204ENST00000368298 PRM1P04553 51 aa4.11□□□□□ -1.75
LMNA-204ENST00000368298 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
LMNA-204ENST00000368298 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
LMNA-204ENST00000368298 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
LMNA-204ENST00000368298 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
LMNA-204ENST00000368298 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
LMNA-204ENST00000368298 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
LMNA-204ENST00000368298 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
LMNA-204ENST00000368298 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
LMNA-204ENST00000368298 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
LMNA-204ENST00000368298 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms