RNA–Protein interactions for RNA: ENST00000368258.7

CCT3-203, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-203ENST00000368258 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
CCT3-203ENST00000368258 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
CCT3-203ENST00000368258 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.7
CCT3-203ENST00000368258 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.7
CCT3-203ENST00000368258 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
CCT3-203ENST00000368258 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
CCT3-203ENST00000368258 KRTAP2-1Q9BYU5 128 aa4.45□□□□□ -1.7
CCT3-203ENST00000368258 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
CCT3-203ENST00000368258 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
CCT3-203ENST00000368258 NEBP20929 6669 aa4.37□□□□□ -1.71
CCT3-203ENST00000368258 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
CCT3-203ENST00000368258 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
CCT3-203ENST00000368258 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
CCT3-203ENST00000368258 MUC12Q9UKN1 5478 aa4.19□□□□□ -1.74
CCT3-203ENST00000368258 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
CCT3-203ENST00000368258 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
CCT3-203ENST00000368258 KRTAP4-8A0A0G2JLE6 195 aa4.15□□□□□ -1.74
CCT3-203ENST00000368258 MT1LQ93083 61 aa4.12□□□□□ -1.75
CCT3-203ENST00000368258 KRTAP5-9P26371 169 aa4.11□□□□□ -1.75
CCT3-203ENST00000368258 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
CCT3-203ENST00000368258 MT1EP04732 61 aa4.07□□□□□ -1.76
CCT3-203ENST00000368258 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
CCT3-203ENST00000368258 LCE1DQ5T752 114 aa4.03□□□□□ -1.76
CCT3-203ENST00000368258 MDN1Q9NU22 5596 aa4.02□□□□□ -1.77
CCT3-203ENST00000368258 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
CCT3-203ENST00000368258 KMT2DO14686 5537 aa3.99□□□□□ -1.77
CCT3-203ENST00000368258 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
CCT3-203ENST00000368258 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
CCT3-203ENST00000368258 SPRR2EP22531 72 aa3.89□□□□□ -1.79
CCT3-203ENST00000368258 SPRR2BP35325 72 aa3.89□□□□□ -1.79
CCT3-203ENST00000368258 SPRR2AP35326 72 aa3.89□□□□□ -1.79
CCT3-203ENST00000368258 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
CCT3-203ENST00000368258 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.79
CCT3-203ENST00000368258 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
CCT3-203ENST00000368258 MT1GP13640 62 aa3.8□□□□□ -1.8
CCT3-203ENST00000368258 MT1MQ8N339 61 aa3.78□□□□□ -1.8
CCT3-203ENST00000368258 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
CCT3-203ENST00000368258 SPRR2DP22532 72 aa3.77□□□□□ -1.81
CCT3-203ENST00000368258 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
CCT3-203ENST00000368258 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
CCT3-203ENST00000368258 MT1AP04731 61 aa3.73□□□□□ -1.81
CCT3-203ENST00000368258 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.82
CCT3-203ENST00000368258 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
CCT3-203ENST00000368258 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
CCT3-203ENST00000368258 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
CCT3-203ENST00000368258 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
CCT3-203ENST00000368258 PRM1P04553 51 aa3.5□□□□□ -1.85
CCT3-203ENST00000368258 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
CCT3-203ENST00000368258 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
CCT3-203ENST00000368258 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
CCT3-203ENST00000368258 MT3P25713 68 aa3.45□□□□□ -1.86
CCT3-203ENST00000368258 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
CCT3-203ENST00000368258 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
CCT3-203ENST00000368258 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
CCT3-203ENST00000368258 MT4P47944 62 aa3.35□□□□□ -1.87
CCT3-203ENST00000368258 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
CCT3-203ENST00000368258 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
CCT3-203ENST00000368258 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
CCT3-203ENST00000368258 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
CCT3-203ENST00000368258 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
CCT3-203ENST00000368258 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
CCT3-203ENST00000368258 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
CCT3-203ENST00000368258 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
CCT3-203ENST00000368258 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.96
CCT3-203ENST00000368258 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
CCT3-203ENST00000368258 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
CCT3-203ENST00000368258 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
CCT3-203ENST00000368258 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
CCT3-203ENST00000368258 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
CCT3-203ENST00000368258 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
CCT3-203ENST00000368258 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
CCT3-203ENST00000368258 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
CCT3-203ENST00000368258 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
CCT3-203ENST00000368258 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
CCT3-203ENST00000368258 PHGR1C9JFL3 82 aa2.03□□□□□ -2.09
CCT3-203ENST00000368258 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
CCT3-203ENST00000368258 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
CCT3-203ENST00000368258 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 9.1 ms