RNA–Protein interactions for RNA: ENST00000367881.9

TMCO1-201, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-201ENST00000367881 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
TMCO1-201ENST00000367881 FSIP2Q5CZC0 6907 aa4.29□□□□□ -1.72
TMCO1-201ENST00000367881 KRTAP19-6Q3LI70 58 aa4.26□□□□□ -1.73
TMCO1-201ENST00000367881 PRO2289Q9P1D8 64 aa4.26□□□□□ -1.73
TMCO1-201ENST00000367881 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
TMCO1-201ENST00000367881 CRCT1Q9UGL9 99 aa4.18□□□□□ -1.74
TMCO1-201ENST00000367881 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
TMCO1-201ENST00000367881 INE1O15225 51 aa4.17□□□□□ -1.74
TMCO1-201ENST00000367881 KRTAP10-7P60409 375 aaPredicted RBP4.13□□□□□ -1.75
TMCO1-201ENST00000367881 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
TMCO1-201ENST00000367881 KMT2DO14686 5537 aa4.01□□□□□ -1.77
TMCO1-201ENST00000367881 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
TMCO1-201ENST00000367881 MACF1Q9UPN3 7388 aaKnown RBP3.93□□□□□ -1.78
TMCO1-201ENST00000367881 KRTAP19-5Q3LI72 72 aa3.92□□□□□ -1.78
TMCO1-201ENST00000367881 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
TMCO1-201ENST00000367881 KRTAP19-7Q3SYF9 63 aa3.84□□□□□ -1.79
TMCO1-201ENST00000367881 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
TMCO1-201ENST00000367881 SPRR2FQ96RM1 72 aa3.79□□□□□ -1.8
TMCO1-201ENST00000367881 MT1EP04732 61 aa3.78□□□□□ -1.8
TMCO1-201ENST00000367881 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
TMCO1-201ENST00000367881 KRTAP6-3Q3LI67 103 aa3.75□□□□□ -1.81
TMCO1-201ENST00000367881 MUC12Q9UKN1 5478 aa3.73□□□□□ -1.81
TMCO1-201ENST00000367881 KRTAP2-3P0C7H8 128 aa3.73□□□□□ -1.81
TMCO1-201ENST00000367881 KRTAP2-4Q9BYR9 128 aa3.73□□□□□ -1.81
TMCO1-201ENST00000367881 KRTAP2-1Q9BYU5 128 aa3.73□□□□□ -1.81
TMCO1-201ENST00000367881 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
TMCO1-201ENST00000367881 MT1LQ93083 61 aa3.69□□□□□ -1.82
TMCO1-201ENST00000367881 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
TMCO1-201ENST00000367881 SPRR2EP22531 72 aa3.62□□□□□ -1.83
TMCO1-201ENST00000367881 SPRR2BP35325 72 aa3.62□□□□□ -1.83
TMCO1-201ENST00000367881 SPRR2AP35326 72 aa3.62□□□□□ -1.83
TMCO1-201ENST00000367881 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
TMCO1-201ENST00000367881 KRTAP2-2Q9BYT5 123 aa3.61□□□□□ -1.83
TMCO1-201ENST00000367881 MT1GP13640 62 aa3.6□□□□□ -1.83
TMCO1-201ENST00000367881 MT1MQ8N339 61 aa3.56□□□□□ -1.84
TMCO1-201ENST00000367881 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
TMCO1-201ENST00000367881 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
TMCO1-201ENST00000367881 SPRR2DP22532 72 aa3.48□□□□□ -1.85
TMCO1-201ENST00000367881 NEBP20929 6669 aa3.47□□□□□ -1.85
TMCO1-201ENST00000367881 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
TMCO1-201ENST00000367881 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
TMCO1-201ENST00000367881 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.88
TMCO1-201ENST00000367881 MT3P25713 68 aa3.32□□□□□ -1.88
TMCO1-201ENST00000367881 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
TMCO1-201ENST00000367881 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
TMCO1-201ENST00000367881 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
TMCO1-201ENST00000367881 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
TMCO1-201ENST00000367881 MT1AP04731 61 aa3.19□□□□□ -1.9
TMCO1-201ENST00000367881 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
TMCO1-201ENST00000367881 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
TMCO1-201ENST00000367881 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
TMCO1-201ENST00000367881 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
TMCO1-201ENST00000367881 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
TMCO1-201ENST00000367881 MT4P47944 62 aa3.04□□□□□ -1.92
TMCO1-201ENST00000367881 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
TMCO1-201ENST00000367881 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
TMCO1-201ENST00000367881 PRM1P04553 51 aa2.9□□□□□ -1.95
TMCO1-201ENST00000367881 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
TMCO1-201ENST00000367881 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
TMCO1-201ENST00000367881 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
TMCO1-201ENST00000367881 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
TMCO1-201ENST00000367881 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.98
TMCO1-201ENST00000367881 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
TMCO1-201ENST00000367881 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
TMCO1-201ENST00000367881 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
TMCO1-201ENST00000367881 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
TMCO1-201ENST00000367881 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
TMCO1-201ENST00000367881 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
TMCO1-201ENST00000367881 MUC5ACP98088 5654 aa2.34□□□□□ -2.03
TMCO1-201ENST00000367881 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
TMCO1-201ENST00000367881 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
TMCO1-201ENST00000367881 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
TMCO1-201ENST00000367881 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
TMCO1-201ENST00000367881 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
TMCO1-201ENST00000367881 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
TMCO1-201ENST00000367881 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
TMCO1-201ENST00000367881 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms