RNA–Protein interactions for RNA: ENST00000367537.7

SMG7-202, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMG7, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-202ENST00000367537 SPRR2BP35325 72 aa2.93□□□□□ -1.94
SMG7-202ENST00000367537 SPRR2AP35326 72 aa2.93□□□□□ -1.94
SMG7-202ENST00000367537 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
SMG7-202ENST00000367537 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
SMG7-202ENST00000367537 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
SMG7-202ENST00000367537 SPRR2DP22532 72 aa2.84□□□□□ -1.95
SMG7-202ENST00000367537 KRTAP4-3Q9BYR4 195 aa2.84□□□□□ -1.95
SMG7-202ENST00000367537 LCE3BQ5TA77 95 aa2.83□□□□□ -1.96
SMG7-202ENST00000367537 LOC100996750A0A140TA64 210 aa2.81□□□□□ -1.96
SMG7-202ENST00000367537 KRTAP19-3Q7Z4W3 81 aa2.81□□□□□ -1.96
SMG7-202ENST00000367537 MT1LQ93083 61 aa2.8□□□□□ -1.96
SMG7-202ENST00000367537 LCE2AQ5TA79 106 aaPredicted RBP2.8□□□□□ -1.96
SMG7-202ENST00000367537 KRTAP19-7Q3SYF9 63 aa2.79□□□□□ -1.96
SMG7-202ENST00000367537 MT1EP04732 61 aa2.77□□□□□ -1.97
SMG7-202ENST00000367537 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
SMG7-202ENST00000367537 MDN1Q9NU22 5596 aa2.74□□□□□ -1.97
SMG7-202ENST00000367537 KRTAP19-6Q3LI70 58 aa2.74□□□□□ -1.97
SMG7-202ENST00000367537 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
SMG7-202ENST00000367537 MACF1Q9UPN3 7388 aaKnown RBP2.73□□□□□ -1.97
SMG7-202ENST00000367537 MT1MQ8N339 61 aa2.67□□□□□ -1.98
SMG7-202ENST00000367537 LCE2DQ5TA82 110 aaPredicted RBP2.64□□□□□ -1.99
SMG7-202ENST00000367537 KRTAP4-9Q9BYQ8 210 aa2.63□□□□□ -1.99
SMG7-202ENST00000367537 MT3P25713 68 aa2.62□□□□□ -1.99
SMG7-202ENST00000367537 KRTAP9-6A0A140TA67 174 aa2.58□□□□□ -2
SMG7-202ENST00000367537 KRTAP9-2Q9BYQ4 174 aa2.57□□□□□ -2
SMG7-202ENST00000367537 KRTAP2-3P0C7H8 128 aa2.53□□□□□ -2
SMG7-202ENST00000367537 KRTAP2-4Q9BYR9 128 aa2.53□□□□□ -2
SMG7-202ENST00000367537 KRTAP2-1Q9BYU5 128 aa2.53□□□□□ -2
SMG7-202ENST00000367537 MT1AP04731 61 aa2.52□□□□□ -2.01
SMG7-202ENST00000367537 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
SMG7-202ENST00000367537 MT4P47944 62 aa2.44□□□□□ -2.02
SMG7-202ENST00000367537 PRM1P04553 51 aa2.43□□□□□ -2.02
SMG7-202ENST00000367537 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
SMG7-202ENST00000367537 KRTAP6-1Q3LI64 71 aa2.39□□□□□ -2.03
SMG7-202ENST00000367537 KRTAP6-3Q3LI67 103 aa2.39□□□□□ -2.03
SMG7-202ENST00000367537 LCE5AQ5TCM9 118 aa2.37□□□□□ -2.03
SMG7-202ENST00000367537 LCE1DQ5T752 114 aa2.36□□□□□ -2.03
SMG7-202ENST00000367537 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
SMG7-202ENST00000367537 KRTAP9-7A8MTY7 169 aa2.32□□□□□ -2.04
SMG7-202ENST00000367537 KRTAP20-1Q3LI63 56 aa2.31□□□□□ -2.04
SMG7-202ENST00000367537 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
SMG7-202ENST00000367537 KRTAP9-4Q9BYQ2 154 aa2.3□□□□□ -2.04
SMG7-202ENST00000367537 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.25□□□□□ -2.05
SMG7-202ENST00000367537 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
SMG7-202ENST00000367537 KRTAP2-2Q9BYT5 123 aa2.22□□□□□ -2.05
SMG7-202ENST00000367537 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
SMG7-202ENST00000367537 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.08
SMG7-202ENST00000367537 KRTAP4-6Q9BYQ5 205 aa2.06□□□□□ -2.08
SMG7-202ENST00000367537 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
SMG7-202ENST00000367537 NEBP20929 6669 aa2.05□□□□□ -2.08
SMG7-202ENST00000367537 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
SMG7-202ENST00000367537 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
SMG7-202ENST00000367537 LCE1EQ5T753 118 aa1.97□□□□□ -2.09
SMG7-202ENST00000367537 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
SMG7-202ENST00000367537 KRTAP9-9Q9BYP9 154 aa1.92□□□□□ -2.1
SMG7-202ENST00000367537 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
SMG7-202ENST00000367537 KRTAP5-4Q6L8H1 288 aa1.82□□□□□ -2.12
SMG7-202ENST00000367537 KRTAP4-11Q9BYQ6 195 aa1.81□□□□□ -2.12
SMG7-202ENST00000367537 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
SMG7-202ENST00000367537 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.13
SMG7-202ENST00000367537 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
SMG7-202ENST00000367537 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
SMG7-202ENST00000367537 KRTAP4-12Q9BQ66 201 aa1.63□□□□□ -2.15
SMG7-202ENST00000367537 KRTAP4-2Q9BYR5 136 aa1.63□□□□□ -2.15
SMG7-202ENST00000367537 KRTAP5-3Q6L8H2 238 aa1.59□□□□□ -2.15
SMG7-202ENST00000367537 KRTAP5-2Q701N4 177 aa1.59□□□□□ -2.16
SMG7-202ENST00000367537 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
SMG7-202ENST00000367537 KRTAP5-1Q6L8H4 278 aa1.46□□□□□ -2.18
SMG7-202ENST00000367537 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
SMG7-202ENST00000367537 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
SMG7-202ENST00000367537 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
SMG7-202ENST00000367537 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
SMG7-202ENST00000367537 KRTAP5-11Q6L8G4 156 aa1.33□□□□□ -2.2
SMG7-202ENST00000367537 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
SMG7-202ENST00000367537 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
SMG7-202ENST00000367537 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
SMG7-202ENST00000367537 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 387 ms