RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 PMAIP1Q13794 54 aa3.04□□□□□ -1.92
H3F3A-201ENST00000366813 CASC2Q6XLA1 102 aa3.04□□□□□ -1.92
H3F3A-201ENST00000366813 LINC00208Q96KT6 92 aa3.04□□□□□ -1.92
H3F3A-201ENST00000366813 TP53AIP1Q9HCN2 124 aa3.04□□□□□ -1.92
H3F3A-201ENST00000366813 H0Y9P7 68 aa3.03□□□□□ -1.92
H3F3A-201ENST00000366813 IGHV6-1A0A0B4J1U7 121 aa3.02□□□□□ -1.93
H3F3A-201ENST00000366813 MMP24-AS1A0A0U1RRL7 71 aa3.02□□□□□ -1.93
H3F3A-201ENST00000366813 A8MUN3 132 aa3.01□□□□□ -1.93
H3F3A-201ENST00000366813 WFDC13Q8IUB5 93 aa3.01□□□□□ -1.93
H3F3A-201ENST00000366813 LINC01558Q9Y6Z2 57 aa3.01□□□□□ -1.93
H3F3A-201ENST00000366813 SPRR2GQ9BYE4 73 aa3□□□□□ -1.93
H3F3A-201ENST00000366813 MT4P47944 62 aa2.98□□□□□ -1.93
H3F3A-201ENST00000366813 COA5Q86WW8 74 aa2.98□□□□□ -1.93
H3F3A-201ENST00000366813 CDC42SE1Q9NRR8 79 aa2.98□□□□□ -1.93
H3F3A-201ENST00000366813 NDUFS5O43920 106 aa2.97□□□□□ -1.93
H3F3A-201ENST00000366813 SPINK7P58062 85 aa2.97□□□□□ -1.93
H3F3A-201ENST00000366813 KTN1-AS1Q86SY8 53 aa2.97□□□□□ -1.93
H3F3A-201ENST00000366813 CHKB-CPT1BH3BT56 60 aa2.96□□□□□ -1.93
H3F3A-201ENST00000366813 LCA10Q71F78 164 aa2.96□□□□□ -1.93
H3F3A-201ENST00000366813 PRR15LQ9BU68 103 aa2.95□□□□□ -1.94
H3F3A-201ENST00000366813 MRPL34Q9BQ48 92 aaKnown RBP2.94□□□□□ -1.94
H3F3A-201ENST00000366813 P0C880 135 aa2.93□□□□□ -1.94
H3F3A-201ENST00000366813 A6NED7 52 aa2.92□□□□□ -1.94
H3F3A-201ENST00000366813 C8orf87E5RJ46 101 aa2.92□□□□□ -1.94
H3F3A-201ENST00000366813 LINC00313P59037 77 aa2.92□□□□□ -1.94
H3F3A-201ENST00000366813 ADM2Q7Z4H4 148 aa2.92□□□□□ -1.94
H3F3A-201ENST00000366813 H1FX-AS1Q4G0G2 97 aa2.91□□□□□ -1.94
H3F3A-201ENST00000366813 C7orf65Q6ZTY9 151 aa2.91□□□□□ -1.94
H3F3A-201ENST00000366813 DMAC1Q96GE9 116 aa2.9□□□□□ -1.95
H3F3A-201ENST00000366813 ACYP2P14621 99 aa2.89□□□□□ -1.95
H3F3A-201ENST00000366813 MT1XP80297 61 aa2.88□□□□□ -1.95
H3F3A-201ENST00000366813 SPATA8Q6RVD6 105 aa2.87□□□□□ -1.95
H3F3A-201ENST00000366813 SPTSSBQ8NFR3 76 aa2.86□□□□□ -1.95
H3F3A-201ENST00000366813 R4GN34 69 aa2.86□□□□□ -1.95
H3F3A-201ENST00000366813 PRO2289Q9P1D8 64 aa2.85□□□□□ -1.95
H3F3A-201ENST00000366813 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.96
H3F3A-201ENST00000366813 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
H3F3A-201ENST00000366813 UQCR11O14957 56 aa2.8□□□□□ -1.96
H3F3A-201ENST00000366813 A0A1B0GU69 56 aa2.79□□□□□ -1.96
H3F3A-201ENST00000366813 MIR22HGQ0VDD5 57 aa2.77□□□□□ -1.97
H3F3A-201ENST00000366813 KRTAP25-1Q3LHN0 102 aa2.74□□□□□ -1.97
H3F3A-201ENST00000366813 LINC01554Q52M75 96 aa2.74□□□□□ -1.97
H3F3A-201ENST00000366813 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
H3F3A-201ENST00000366813 K7ERS5 55 aa2.7□□□□□ -1.98
H3F3A-201ENST00000366813 CSAG1Q6PB30 78 aa2.7□□□□□ -1.98
H3F3A-201ENST00000366813 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
H3F3A-201ENST00000366813 CRIPTQ9P021 101 aa2.69□□□□□ -1.98
H3F3A-201ENST00000366813 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
H3F3A-201ENST00000366813 H0YAA0 97 aa2.67□□□□□ -1.98
H3F3A-201ENST00000366813 KRTAP19-3Q7Z4W3 81 aa2.67□□□□□ -1.98
H3F3A-201ENST00000366813 PLAC4Q8WY50 150 aa2.67□□□□□ -1.98
H3F3A-201ENST00000366813 S4R3F8 94 aa2.65□□□□□ -1.99
H3F3A-201ENST00000366813 A0A1B0GU33 70 aa2.64□□□□□ -1.99
H3F3A-201ENST00000366813 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
H3F3A-201ENST00000366813 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
H3F3A-201ENST00000366813 MT1EP04732 61 aa2.58□□□□□ -2
H3F3A-201ENST00000366813 ROMO1P60602 79 aa2.58□□□□□ -2
H3F3A-201ENST00000366813 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
H3F3A-201ENST00000366813 MT1GP13640 62 aa2.53□□□□□ -2
H3F3A-201ENST00000366813 MT1MQ8N339 61 aa2.5□□□□□ -2.01
H3F3A-201ENST00000366813 KRTAP13-4Q3LI77 160 aa2.48□□□□□ -2.01
H3F3A-201ENST00000366813 SYNE1Q8NF91 8797 aaKnown RBP2.46□□□□□ -2.02
H3F3A-201ENST00000366813 M0QZ58 72 aa2.45□□□□□ -2.02
H3F3A-201ENST00000366813 KRTAP12-1P59990 96 aa2.42□□□□□ -2.02
H3F3A-201ENST00000366813 A0A0D9SG42 100 aa2.39□□□□□ -2.03
H3F3A-201ENST00000366813 KRTAP19-5Q3LI72 72 aa2.37□□□□□ -2.03
H3F3A-201ENST00000366813 MT1LQ93083 61 aa2.37□□□□□ -2.03
H3F3A-201ENST00000366813 C10orf95Q9H7T3 257 aa2.36□□□□□ -2.03
H3F3A-201ENST00000366813 TNP1P09430 55 aa2.15□□□□□ -2.07
H3F3A-201ENST00000366813 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
H3F3A-201ENST00000366813 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
H3F3A-201ENST00000366813 INE1O15225 51 aa2□□□□□ -2.09
H3F3A-201ENST00000366813 MT1AP04731 61 aa1.99□□□□□ -2.09
H3F3A-201ENST00000366813 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
H3F3A-201ENST00000366813 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
H3F3A-201ENST00000366813 PRM1P04553 51 aa1.33□□□□□ -2.2
H3F3A-201ENST00000366813 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 68.8 ms