RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
NID1-202ENST00000366595 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
NID1-202ENST00000366595 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
NID1-202ENST00000366595 TNXBP22105 4242 aa4.78□□□□□ -1.64
NID1-202ENST00000366595 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
NID1-202ENST00000366595 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
NID1-202ENST00000366595 PCLOQ9Y6V0 5065 aa4.72□□□□□ -1.65
NID1-202ENST00000366595 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
NID1-202ENST00000366595 LCE5AQ5TCM9 118 aa4.68□□□□□ -1.66
NID1-202ENST00000366595 BIRC6Q9NR09 4857 aa4.65□□□□□ -1.66
NID1-202ENST00000366595 KRTAP19-7Q3SYF9 63 aa4.62□□□□□ -1.67
NID1-202ENST00000366595 EPPK1P58107 5090 aaKnown RBP4.6□□□□□ -1.67
NID1-202ENST00000366595 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
NID1-202ENST00000366595 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
NID1-202ENST00000366595 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
NID1-202ENST00000366595 ABCA13Q86UQ4 5058 aa4.44□□□□□ -1.7
NID1-202ENST00000366595 HMCN2Q8NDA2 5059 aa4.42□□□□□ -1.7
NID1-202ENST00000366595 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
NID1-202ENST00000366595 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
NID1-202ENST00000366595 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
NID1-202ENST00000366595 UBR4Q5T4S7 5183 aa4.38□□□□□ -1.71
NID1-202ENST00000366595 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
NID1-202ENST00000366595 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
NID1-202ENST00000366595 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
NID1-202ENST00000366595 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
NID1-202ENST00000366595 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
NID1-202ENST00000366595 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
NID1-202ENST00000366595 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
NID1-202ENST00000366595 FAT4Q6V0I7 4981 aa4.27□□□□□ -1.73
NID1-202ENST00000366595 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
NID1-202ENST00000366595 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
NID1-202ENST00000366595 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
NID1-202ENST00000366595 KRTAP6-3Q3LI67 103 aa4.18□□□□□ -1.74
NID1-202ENST00000366595 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
NID1-202ENST00000366595 KRTAP9-6A0A140TA67 174 aa4.17□□□□□ -1.74
NID1-202ENST00000366595 FSIP2Q5CZC0 6907 aa4.17□□□□□ -1.74
NID1-202ENST00000366595 MUC2Q02817 5179 aa4.04□□□□□ -1.76
NID1-202ENST00000366595 SYNE2Q8WXH0 6885 aaKnown RBP3.98□□□□□ -1.77
NID1-202ENST00000366595 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
NID1-202ENST00000366595 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.79
NID1-202ENST00000366595 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
NID1-202ENST00000366595 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
NID1-202ENST00000366595 USH2AO75445 5202 aa3.77□□□□□ -1.81
NID1-202ENST00000366595 KMT2DO14686 5537 aa3.72□□□□□ -1.81
NID1-202ENST00000366595 DSTQ03001 7570 aaKnown RBP3.64□□□□□ -1.83
NID1-202ENST00000366595 MUC12Q9UKN1 5478 aa3.62□□□□□ -1.83
NID1-202ENST00000366595 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
NID1-202ENST00000366595 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
NID1-202ENST00000366595 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
NID1-202ENST00000366595 SSPOA2VEC9 5147 aa3.46□□□□□ -1.86
NID1-202ENST00000366595 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
NID1-202ENST00000366595 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
NID1-202ENST00000366595 NEBP20929 6669 aa3.32□□□□□ -1.88
NID1-202ENST00000366595 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
NID1-202ENST00000366595 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
NID1-202ENST00000366595 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
NID1-202ENST00000366595 MDN1Q9NU22 5596 aa3.2□□□□□ -1.9
NID1-202ENST00000366595 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
NID1-202ENST00000366595 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
NID1-202ENST00000366595 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
NID1-202ENST00000366595 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
NID1-202ENST00000366595 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
NID1-202ENST00000366595 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
NID1-202ENST00000366595 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
NID1-202ENST00000366595 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
NID1-202ENST00000366595 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
NID1-202ENST00000366595 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
NID1-202ENST00000366595 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
NID1-202ENST00000366595 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
NID1-202ENST00000366595 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
NID1-202ENST00000366595 KRTAP5-1Q6L8H4 278 aa2.22□□□□□ -2.05
NID1-202ENST00000366595 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
NID1-202ENST00000366595 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
NID1-202ENST00000366595 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
NID1-202ENST00000366595 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
NID1-202ENST00000366595 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
NID1-202ENST00000366595 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 102 ms