RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 KRTAP10-5P60370 271 aa4.9□□□□□ -1.63
CSNK1E-202ENST00000366216 SPRR2EP22531 72 aa4.89□□□□□ -1.63
CSNK1E-202ENST00000366216 SPRR2BP35325 72 aa4.89□□□□□ -1.63
CSNK1E-202ENST00000366216 SPRR2AP35326 72 aa4.89□□□□□ -1.63
CSNK1E-202ENST00000366216 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.63
CSNK1E-202ENST00000366216 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
CSNK1E-202ENST00000366216 KRTAP19-8Q3LI54 63 aa4.83□□□□□ -1.64
CSNK1E-202ENST00000366216 KTN1-AS1Q86SY8 53 aa4.81□□□□□ -1.64
CSNK1E-202ENST00000366216 ROMO1P60602 79 aa4.8□□□□□ -1.64
CSNK1E-202ENST00000366216 PLAC4Q8WY50 150 aa4.78□□□□□ -1.64
CSNK1E-202ENST00000366216 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
CSNK1E-202ENST00000366216 CAMK2N1Q7Z7J9 78 aa4.76□□□□□ -1.65
CSNK1E-202ENST00000366216 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
CSNK1E-202ENST00000366216 SPRR2DP22532 72 aa4.74□□□□□ -1.65
CSNK1E-202ENST00000366216 PRAC1Q96KF2 57 aa4.73□□□□□ -1.65
CSNK1E-202ENST00000366216 C10orf95Q9H7T3 257 aa4.7□□□□□ -1.66
CSNK1E-202ENST00000366216 KRTAP8-1Q8IUC2 63 aa4.64□□□□□ -1.67
CSNK1E-202ENST00000366216 KRTAP25-1Q3LHN0 102 aa4.6□□□□□ -1.67
CSNK1E-202ENST00000366216 MT1XP80297 61 aa4.58□□□□□ -1.68
CSNK1E-202ENST00000366216 TNP1P09430 55 aa4.56□□□□□ -1.68
CSNK1E-202ENST00000366216 PRO2289Q9P1D8 64 aa4.55□□□□□ -1.68
CSNK1E-202ENST00000366216 DSTQ03001 7570 aaKnown RBP4.51□□□□□ -1.69
CSNK1E-202ENST00000366216 MT3P25713 68 aa4.49□□□□□ -1.69
CSNK1E-202ENST00000366216 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
CSNK1E-202ENST00000366216 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
CSNK1E-202ENST00000366216 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
CSNK1E-202ENST00000366216 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
CSNK1E-202ENST00000366216 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
CSNK1E-202ENST00000366216 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
CSNK1E-202ENST00000366216 AHNAK2Q8IVF2 5795 aa4.3□□□□□ -1.72
CSNK1E-202ENST00000366216 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
CSNK1E-202ENST00000366216 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
CSNK1E-202ENST00000366216 MT4P47944 62 aa4.19□□□□□ -1.74
CSNK1E-202ENST00000366216 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
CSNK1E-202ENST00000366216 KRTAP5-7Q6L8G8 165 aa4.17□□□□□ -1.74
CSNK1E-202ENST00000366216 KRTAP19-5Q3LI72 72 aa4.13□□□□□ -1.75
CSNK1E-202ENST00000366216 KRTAP19-7Q3SYF9 63 aa4.09□□□□□ -1.75
CSNK1E-202ENST00000366216 KRTAP19-3Q7Z4W3 81 aa4.07□□□□□ -1.76
CSNK1E-202ENST00000366216 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
CSNK1E-202ENST00000366216 MT1EP04732 61 aa4.02□□□□□ -1.77
CSNK1E-202ENST00000366216 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
CSNK1E-202ENST00000366216 MT1LQ93083 61 aa3.94□□□□□ -1.78
CSNK1E-202ENST00000366216 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
CSNK1E-202ENST00000366216 MT1GP13640 62 aa3.91□□□□□ -1.78
CSNK1E-202ENST00000366216 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
CSNK1E-202ENST00000366216 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
CSNK1E-202ENST00000366216 MT1MQ8N339 61 aa3.85□□□□□ -1.79
CSNK1E-202ENST00000366216 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
CSNK1E-202ENST00000366216 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
CSNK1E-202ENST00000366216 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
CSNK1E-202ENST00000366216 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
CSNK1E-202ENST00000366216 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
CSNK1E-202ENST00000366216 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
CSNK1E-202ENST00000366216 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
CSNK1E-202ENST00000366216 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
CSNK1E-202ENST00000366216 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
CSNK1E-202ENST00000366216 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
CSNK1E-202ENST00000366216 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
CSNK1E-202ENST00000366216 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
CSNK1E-202ENST00000366216 MT1AP04731 61 aa3.36□□□□□ -1.87
CSNK1E-202ENST00000366216 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
CSNK1E-202ENST00000366216 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
CSNK1E-202ENST00000366216 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
CSNK1E-202ENST00000366216 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
CSNK1E-202ENST00000366216 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
CSNK1E-202ENST00000366216 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
CSNK1E-202ENST00000366216 INE1O15225 51 aa3.12□□□□□ -1.91
CSNK1E-202ENST00000366216 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
CSNK1E-202ENST00000366216 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
CSNK1E-202ENST00000366216 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
CSNK1E-202ENST00000366216 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
CSNK1E-202ENST00000366216 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
CSNK1E-202ENST00000366216 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
CSNK1E-202ENST00000366216 PRM1P04553 51 aa2.49□□□□□ -2.01
CSNK1E-202ENST00000366216 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
CSNK1E-202ENST00000366216 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
CSNK1E-202ENST00000366216 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
CSNK1E-202ENST00000366216 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 370 ms