RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 Q9Y3F1 56 aa-2.25□□□□□ -2.77
RNU4-28P-201ENST00000364739 FAUP35544 74 aaKnown RBP-2.26□□□□□ -2.77
RNU4-28P-201ENST00000364739 SVBPQ8N300 66 aa-2.26□□□□□ -2.77
RNU4-28P-201ENST00000364739 ARPC4P59998 168 aa-2.27□□□□□ -2.77
RNU4-28P-201ENST00000364739 TMEM203Q969S6 136 aa-2.27□□□□□ -2.77
RNU4-28P-201ENST00000364739 ABCA10Q8WWZ4 1543 aa-2.27□□□□□ -2.77
RNU4-28P-201ENST00000364739 SNAPC5O75971 98 aa-2.28□□□□□ -2.77
RNU4-28P-201ENST00000364739 NCMAPQ5T1S8 102 aa-2.28□□□□□ -2.77
RNU4-28P-201ENST00000364739 LINC00643Q86TS7 51 aa-2.28□□□□□ -2.77
RNU4-28P-201ENST00000364739 ERICH3Q5RHP9 1530 aa-2.28□□□□□ -2.77
RNU4-28P-201ENST00000364739 IQGAP3Q86VI3 1631 aa-2.28□□□□□ -2.77
RNU4-28P-201ENST00000364739 HMGN1P05114 100 aa-2.29□□□□□ -2.78
RNU4-28P-201ENST00000364739 S100A10P60903 97 aa-2.29□□□□□ -2.78
RNU4-28P-201ENST00000364739 ATXN8Q156A1 80 aa-2.29□□□□□ -2.78
RNU4-28P-201ENST00000364739 FAM25AB3EWG3 89 aa-2.3□□□□□ -2.78
RNU4-28P-201ENST00000364739 FAM25CB3EWG5 89 aa-2.3□□□□□ -2.78
RNU4-28P-201ENST00000364739 FAM25GB3EWG6 89 aa-2.3□□□□□ -2.78
RNU4-28P-201ENST00000364739 SNRPFP62306 86 aaKnown RBP-2.3□□□□□ -2.78
RNU4-28P-201ENST00000364739 COX14Q96I36 57 aa-2.3□□□□□ -2.78
RNU4-28P-201ENST00000364739 IGIPA6NJ69 53 aa-2.31□□□□□ -2.78
RNU4-28P-201ENST00000364739 STATHP02808 62 aa-2.31□□□□□ -2.78
RNU4-28P-201ENST00000364739 PLNP26678 52 aa-2.31□□□□□ -2.78
RNU4-28P-201ENST00000364739 PRCDQ00LT1 54 aa-2.31□□□□□ -2.78
RNU4-28P-201ENST00000364739 H3BVH4 76 aa-2.32□□□□□ -2.78
RNU4-28P-201ENST00000364739 AKAIN1P0CW23 69 aa-2.32□□□□□ -2.78
RNU4-28P-201ENST00000364739 TMEM167AQ8TBQ9 72 aa-2.32□□□□□ -2.78
RNU4-28P-201ENST00000364739 MROH2BQ7Z745 1585 aa-2.32□□□□□ -2.78
RNU4-28P-201ENST00000364739 TCEAL7Q9BRU2 100 aa-2.33□□□□□ -2.78
RNU4-28P-201ENST00000364739 UGGT2Q9NYU1 1516 aa-2.33□□□□□ -2.78
RNU4-28P-201ENST00000364739 PPP3R1P63098 170 aa-2.35□□□□□ -2.79
RNU4-28P-201ENST00000364739 DLEU1O43261 78 aa-2.36□□□□□ -2.79
RNU4-28P-201ENST00000364739 RPL39P62891 51 aaKnown RBP-2.36□□□□□ -2.79
RNU4-28P-201ENST00000364739 ST20Q9HBF5 79 aa-2.36□□□□□ -2.79
RNU4-28P-201ENST00000364739 KANTRA0A1W2PQU2 76 aa-2.37□□□□□ -2.79
RNU4-28P-201ENST00000364739 DEFB108BQ8NET1 73 aa-2.37□□□□□ -2.79
RNU4-28P-201ENST00000364739 ABCA6Q8N139 1617 aa-2.38□□□□□ -2.79
RNU4-28P-201ENST00000364739 SAMD9LQ8IVG5 1584 aa-2.38□□□□□ -2.79
RNU4-28P-201ENST00000364739 LINC01549A6NIU2 74 aa-2.39□□□□□ -2.79
RNU4-28P-201ENST00000364739 GNG7O60262 68 aa-2.39□□□□□ -2.79
RNU4-28P-201ENST00000364739 GNG13Q9P2W3 67 aa-2.39□□□□□ -2.79
RNU4-28P-201ENST00000364739 EFCAB5A4FU69 1503 aa-2.39□□□□□ -2.79
RNU4-28P-201ENST00000364739 GNG4P50150 75 aa-2.4□□□□□ -2.79
RNU4-28P-201ENST00000364739 GTF2H5Q6ZYL4 71 aa-2.4□□□□□ -2.79
RNU4-28P-201ENST00000364739 RPL39LQ96EH5 51 aaKnown RBP-2.4□□□□□ -2.79
RNU4-28P-201ENST00000364739 K7EIM0 57 aa-2.42□□□□□ -2.8
RNU4-28P-201ENST00000364739 CNTLNQ9NXG0 1405 aa-2.42□□□□□ -2.8
RNU4-28P-201ENST00000364739 DEFB108AA8MXU0 73 aa-2.44□□□□□ -2.8
RNU4-28P-201ENST00000364739 S100A16Q96FQ6 103 aaKnown RBP-2.44□□□□□ -2.8
RNU4-28P-201ENST00000364739 HILPDAQ9Y5L2 63 aa-2.44□□□□□ -2.8
RNU4-28P-201ENST00000364739 CPS1P31327 1500 aa-2.44□□□□□ -2.8
RNU4-28P-201ENST00000364739 IQGAP2Q13576 1575 aa-2.44□□□□□ -2.8
RNU4-28P-201ENST00000364739 PYY3Q5JQD4 70 aa-2.47□□□□□ -2.8
RNU4-28P-201ENST00000364739 ARHGAP5-AS1Q96IT6 56 aa-2.47□□□□□ -2.8
RNU4-28P-201ENST00000364739 CORTO00230 105 aa-2.49□□□□□ -2.81
RNU4-28P-201ENST00000364739 SMCO4Q9NRQ5 59 aa-2.49□□□□□ -2.81
RNU4-28P-201ENST00000364739 SNRPGP15A8MWD9 76 aa-2.52□□□□□ -2.81
RNU4-28P-201ENST00000364739 ADIRFQ15847 76 aa-2.52□□□□□ -2.81
RNU4-28P-201ENST00000364739 Q9H521 79 aa-2.52□□□□□ -2.81
RNU4-28P-201ENST00000364739 ATP6V1G2-DDX39BF2Z307 99 aa-2.54□□□□□ -2.82
RNU4-28P-201ENST00000364739 M0R143 59 aa-2.54□□□□□ -2.82
RNU4-28P-201ENST00000364739 C18orf32Q8TCD1 76 aa-2.54□□□□□ -2.82
RNU4-28P-201ENST00000364739 FANCD2Q9BXW9 1451 aa-2.54□□□□□ -2.82
RNU4-28P-201ENST00000364739 C14orf144Q96I85 54 aa-2.55□□□□□ -2.82
RNU4-28P-201ENST00000364739 A0A1B0GV90 55 aa-2.56□□□□□ -2.82
RNU4-28P-201ENST00000364739 CMC2Q9NRP2 79 aa-2.57□□□□□ -2.82
RNU4-28P-201ENST00000364739 GNG8Q9UK08 70 aa-2.57□□□□□ -2.82
RNU4-28P-201ENST00000364739 V9GYS6 101 aa-2.59□□□□□ -2.82
RNU4-28P-201ENST00000364739 RPL39P5Q59GN2 51 aa-2.61□□□□□ -2.83
RNU4-28P-201ENST00000364739 S100A13Q99584 98 aa-2.61□□□□□ -2.83
RNU4-28P-201ENST00000364739 GCC2Q8IWJ2 1684 aa-2.66□□□□□ -2.83
RNU4-28P-201ENST00000364739 SNRPGP62308 76 aaKnown RBP-2.66□□□□□ -2.84
RNU4-28P-201ENST00000364739 SMIM5Q71RC9 77 aa-2.72□□□□□ -2.84
RNU4-28P-201ENST00000364739 LOC105371267A0A1B0GV96 52 aa-2.77□□□□□ -2.85
RNU4-28P-201ENST00000364739 EFCAB10A6NFE3 127 aa-2.78□□□□□ -2.85
RNU4-28P-201ENST00000364739 GNG2P59768 71 aa-2.82□□□□□ -2.86
RNU4-28P-201ENST00000364739 SMIM31A0A1B0GVY4 71 aa-2.93□□□□□ -2.88
RNU4-28P-201ENST00000364739 TOMM5Q8N4H5 51 aa-2.96□□□□□ -2.88
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms