RNA–Protein interactions for RNA: ENST00000364019.1

RNU4-13P-201, Transcript of RNA, U4 small nuclear 13, pseudogene, humanhuman

BASIC

Gene RNU4-13P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-13P-201ENST00000364019 CRIPTQ9P021 101 aa0.57□□□□□ -2.32
RNU4-13P-201ENST00000364019 MACF1Q9UPN3 7388 aaKnown RBP0.56□□□□□ -2.32
RNU4-13P-201ENST00000364019 MUC12Q9UKN1 5478 aa0.56□□□□□ -2.32
RNU4-13P-201ENST00000364019 J3QR89 54 aa0.56□□□□□ -2.32
RNU4-13P-201ENST00000364019 SPRR2EP22531 72 aa0.56□□□□□ -2.32
RNU4-13P-201ENST00000364019 SPRR2BP35325 72 aa0.56□□□□□ -2.32
RNU4-13P-201ENST00000364019 SPRR2AP35326 72 aa0.56□□□□□ -2.32
RNU4-13P-201ENST00000364019 MP68P56378 58 aa0.56□□□□□ -2.32
RNU4-13P-201ENST00000364019 SPATA8Q6RVD6 105 aa0.56□□□□□ -2.32
RNU4-13P-201ENST00000364019 KRTAP8-1Q8IUC2 63 aa0.56□□□□□ -2.32
RNU4-13P-201ENST00000364019 C10orf95Q9H7T3 257 aa0.56□□□□□ -2.32
RNU4-13P-201ENST00000364019 ACYP2P14621 99 aa0.55□□□□□ -2.32
RNU4-13P-201ENST00000364019 KRTAP20-1Q3LI63 56 aa0.55□□□□□ -2.32
RNU4-13P-201ENST00000364019 KRTAP19-5Q3LI72 72 aa0.55□□□□□ -2.32
RNU4-13P-201ENST00000364019 LINC01554Q52M75 96 aa0.55□□□□□ -2.32
RNU4-13P-201ENST00000364019 MT1LQ93083 61 aa0.55□□□□□ -2.32
RNU4-13P-201ENST00000364019 R4GN34 69 aa0.55□□□□□ -2.32
RNU4-13P-201ENST00000364019 SYNE2Q8WXH0 6885 aaKnown RBP0.55□□□□□ -2.32
RNU4-13P-201ENST00000364019 KRTAP2-3P0C7H8 128 aa0.54□□□□□ -2.32
RNU4-13P-201ENST00000364019 SCGB1A1P11684 91 aa0.54□□□□□ -2.32
RNU4-13P-201ENST00000364019 KRTAP19-3Q7Z4W3 81 aa0.54□□□□□ -2.32
RNU4-13P-201ENST00000364019 MT1MQ8N339 61 aa0.54□□□□□ -2.32
RNU4-13P-201ENST00000364019 SMIM20Q8N5G0 67 aa0.54□□□□□ -2.32
RNU4-13P-201ENST00000364019 KRTAP2-4Q9BYR9 128 aa0.54□□□□□ -2.32
RNU4-13P-201ENST00000364019 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
RNU4-13P-201ENST00000364019 SPRR2DP22532 72 aa0.53□□□□□ -2.32
RNU4-13P-201ENST00000364019 KRTAP2-1Q9BYU5 128 aa0.53□□□□□ -2.32
RNU4-13P-201ENST00000364019 A0A0D9SG42 100 aa0.52□□□□□ -2.33
RNU4-13P-201ENST00000364019 PLAC4Q8WY50 150 aa0.52□□□□□ -2.33
RNU4-13P-201ENST00000364019 ANAPC13Q9BS18 74 aa0.52□□□□□ -2.33
RNU4-13P-201ENST00000364019 PRO2289Q9P1D8 64 aa0.52□□□□□ -2.33
RNU4-13P-201ENST00000364019 LINC01558Q9Y6Z2 57 aa0.52□□□□□ -2.33
RNU4-13P-201ENST00000364019 A0A1B0GU33 70 aa0.51□□□□□ -2.33
RNU4-13P-201ENST00000364019 MT1GP13640 62 aa0.51□□□□□ -2.33
RNU4-13P-201ENST00000364019 NEBP20929 6669 aa0.51□□□□□ -2.33
RNU4-13P-201ENST00000364019 CHKB-CPT1BH3BT56 60 aa0.5□□□□□ -2.33
RNU4-13P-201ENST00000364019 A0A1B0GU69 56 aa0.49□□□□□ -2.33
RNU4-13P-201ENST00000364019 TMEM258P61165 79 aa0.49□□□□□ -2.33
RNU4-13P-201ENST00000364019 KRTAP5-10Q6L8G5 202 aa0.49□□□□□ -2.33
RNU4-13P-201ENST00000364019 SPTSSBQ8NFR3 76 aa0.49□□□□□ -2.33
RNU4-13P-201ENST00000364019 ATP5EP56381 51 aaPredicted RBP0.48□□□□□ -2.33
RNU4-13P-201ENST00000364019 Q1T7F1 81 aa0.48□□□□□ -2.33
RNU4-13P-201ENST00000364019 KRTAP20-2Q3LI61 65 aa0.48□□□□□ -2.33
RNU4-13P-201ENST00000364019 LUZP6Q538Z0 58 aa0.48□□□□□ -2.33
RNU4-13P-201ENST00000364019 PRR15LQ9BU68 103 aa0.48□□□□□ -2.33
RNU4-13P-201ENST00000364019 SERP1Q9Y6X1 66 aa0.48□□□□□ -2.33
RNU4-13P-201ENST00000364019 DSTQ03001 7570 aaKnown RBP0.47□□□□□ -2.33
RNU4-13P-201ENST00000364019 SMIM26A0A096LP01 95 aa0.47□□□□□ -2.33
RNU4-13P-201ENST00000364019 PSPHP1O15172 72 aa0.47□□□□□ -2.33
RNU4-13P-201ENST00000364019 MT4P47944 62 aa0.47□□□□□ -2.33
RNU4-13P-201ENST00000364019 KRTAP6-1Q3LI64 71 aa0.47□□□□□ -2.33
RNU4-13P-201ENST00000364019 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
RNU4-13P-201ENST00000364019 SYNE1Q8NF91 8797 aaKnown RBP0.46□□□□□ -2.34
RNU4-13P-201ENST00000364019 TNP1P09430 55 aa0.46□□□□□ -2.34
RNU4-13P-201ENST00000364019 MIR22HGQ0VDD5 57 aa0.46□□□□□ -2.34
RNU4-13P-201ENST00000364019 UQCR11O14957 56 aa0.45□□□□□ -2.34
RNU4-13P-201ENST00000364019 MT1AP04731 61 aa0.45□□□□□ -2.34
RNU4-13P-201ENST00000364019 RPS28P62857 69 aaKnown RBP0.45□□□□□ -2.34
RNU4-13P-201ENST00000364019 KRTAP25-1Q3LHN0 102 aa0.45□□□□□ -2.34
RNU4-13P-201ENST00000364019 AHNAKQ09666 5890 aaKnown RBP0.44□□□□□ -2.34
RNU4-13P-201ENST00000364019 CDC42SE1Q9NRR8 79 aa0.43□□□□□ -2.34
RNU4-13P-201ENST00000364019 A6NED7 52 aa0.42□□□□□ -2.34
RNU4-13P-201ENST00000364019 ROMO1P60602 79 aa0.42□□□□□ -2.34
RNU4-13P-201ENST00000364019 KRTAP6-2Q3LI66 62 aa0.42□□□□□ -2.34
RNU4-13P-201ENST00000364019 V9GYY9 64 aa0.41□□□□□ -2.34
RNU4-13P-201ENST00000364019 MUC5BQ9HC84 5762 aaPredicted RBP0.37□□□□□ -2.35
RNU4-13P-201ENST00000364019 K7ERS5 55 aa0.36□□□□□ -2.35
RNU4-13P-201ENST00000364019 BRK1Q8WUW1 75 aa0.36□□□□□ -2.35
RNU4-13P-201ENST00000364019 MUC5ACP98088 5654 aa0.35□□□□□ -2.35
RNU4-13P-201ENST00000364019 GPR98Q8WXG9 6306 aa0.34□□□□□ -2.35
RNU4-13P-201ENST00000364019 PMAIP1Q13794 54 aa0.32□□□□□ -2.36
RNU4-13P-201ENST00000364019 PRO0628Q9UI54 55 aa0.32□□□□□ -2.36
RNU4-13P-201ENST00000364019 KTN1-AS1Q86SY8 53 aa0.31□□□□□ -2.36
RNU4-13P-201ENST00000364019 PHGR1C9JFL3 82 aa0.27□□□□□ -2.37
RNU4-13P-201ENST00000364019 PRM1P04553 51 aa0.24□□□□□ -2.37
RNU4-13P-201ENST00000364019 KRTAP21-1Q3LI58 79 aa0.17□□□□□ -2.38
RNU4-13P-201ENST00000364019 INE1O15225 51 aa0.13□□□□□ -2.39
Retrieved 77 of 20,778 RNA–protein pairs in 7.2 ms