RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 K7EP34 96 aa1.74□□□□□ -2.13
RNU4-39P-201ENST00000362455 SNURFQ9Y675 71 aa1.74□□□□□ -2.13
RNU4-39P-201ENST00000362455 TAX1BP3O14907 124 aa1.73□□□□□ -2.13
RNU4-39P-201ENST00000362455 KRTAP5-10Q6L8G5 202 aa1.73□□□□□ -2.13
RNU4-39P-201ENST00000362455 KRTAP19-7Q3SYF9 63 aa1.72□□□□□ -2.13
RNU4-39P-201ENST00000362455 NDUFC1O43677 76 aa1.71□□□□□ -2.14
RNU4-39P-201ENST00000362455 MT4P47944 62 aa1.7□□□□□ -2.14
RNU4-39P-201ENST00000362455 TP53AIP1Q9HCN2 124 aa1.7□□□□□ -2.14
RNU4-39P-201ENST00000362455 M0QZ58 72 aa1.69□□□□□ -2.14
RNU4-39P-201ENST00000362455 MT1EP04732 61 aa1.69□□□□□ -2.14
RNU4-39P-201ENST00000362455 KRTAP19-3Q7Z4W3 81 aa1.69□□□□□ -2.14
RNU4-39P-201ENST00000362455 LOC101927531A0A1B0GV80 90 aa1.66□□□□□ -2.14
RNU4-39P-201ENST00000362455 TSTD3H0UI37 97 aa1.66□□□□□ -2.14
RNU4-39P-201ENST00000362455 M0R143 59 aa1.66□□□□□ -2.14
RNU4-39P-201ENST00000362455 TRAV22A0A0B4J277 110 aa1.65□□□□□ -2.15
RNU4-39P-201ENST00000362455 A0A1W2PPM0 123 aa1.65□□□□□ -2.15
RNU4-39P-201ENST00000362455 UBL5Q9BZL1 73 aa1.65□□□□□ -2.15
RNU4-39P-201ENST00000362455 SPCS1Q9Y6A9 102 aa1.65□□□□□ -2.15
RNU4-39P-201ENST00000362455 ACYP1P07311 99 aa1.64□□□□□ -2.15
RNU4-39P-201ENST00000362455 SMIM20Q8N5G0 67 aa1.64□□□□□ -2.15
RNU4-39P-201ENST00000362455 MT1GP13640 62 aa1.63□□□□□ -2.15
RNU4-39P-201ENST00000362455 SYNE1Q8NF91 8797 aaKnown RBP1.63□□□□□ -2.15
RNU4-39P-201ENST00000362455 SCGB1A1P11684 91 aa1.62□□□□□ -2.15
RNU4-39P-201ENST00000362455 ROMO1P60602 79 aa1.62□□□□□ -2.15
RNU4-39P-201ENST00000362455 MT1MQ8N339 61 aa1.62□□□□□ -2.15
RNU4-39P-201ENST00000362455 H0Y9P7 68 aa1.61□□□□□ -2.15
RNU4-39P-201ENST00000362455 CDC42SE1Q9NRR8 79 aa1.61□□□□□ -2.15
RNU4-39P-201ENST00000362455 UQCRQO14949 82 aa1.6□□□□□ -2.15
RNU4-39P-201ENST00000362455 KRTAP19-5Q3LI72 72 aa1.6□□□□□ -2.15
RNU4-39P-201ENST00000362455 C20orf197Q8N268 126 aa1.6□□□□□ -2.15
RNU4-39P-201ENST00000362455 MT1LQ93083 61 aa1.59□□□□□ -2.15
RNU4-39P-201ENST00000362455 A0A1B0GV90 55 aa1.58□□□□□ -2.16
RNU4-39P-201ENST00000362455 INE1O15225 51 aa1.58□□□□□ -2.16
RNU4-39P-201ENST00000362455 LINC00208Q96KT6 92 aa1.58□□□□□ -2.16
RNU4-39P-201ENST00000362455 ATOX1O00244 68 aa1.57□□□□□ -2.16
RNU4-39P-201ENST00000362455 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
RNU4-39P-201ENST00000362455 DMAC1Q96GE9 116 aa1.57□□□□□ -2.16
RNU4-39P-201ENST00000362455 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
RNU4-39P-201ENST00000362455 MT-ATP8P03928 68 aa1.56□□□□□ -2.16
RNU4-39P-201ENST00000362455 SMIM6P0DI80 62 aa1.55□□□□□ -2.16
RNU4-39P-201ENST00000362455 A0A0D9SG42 100 aa1.54□□□□□ -2.16
RNU4-39P-201ENST00000362455 ETDBQ3ZM63 59 aa1.54□□□□□ -2.16
RNU4-39P-201ENST00000362455 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
RNU4-39P-201ENST00000362455 MUC5ACP98088 5654 aa1.51□□□□□ -2.17
RNU4-39P-201ENST00000362455 RPS28P62857 69 aaKnown RBP1.51□□□□□ -2.17
RNU4-39P-201ENST00000362455 F8W1H4 67 aa1.49□□□□□ -2.17
RNU4-39P-201ENST00000362455 C10orf95Q9H7T3 257 aa1.49□□□□□ -2.17
RNU4-39P-201ENST00000362455 K7ERU9 68 aa1.48□□□□□ -2.17
RNU4-39P-201ENST00000362455 COL5A1-AS1Q5SY13 56 aa1.48□□□□□ -2.17
RNU4-39P-201ENST00000362455 ATP5EP2Q5VTU8 51 aa1.48□□□□□ -2.17
RNU4-39P-201ENST00000362455 ACYP2P14621 99 aa1.46□□□□□ -2.18
RNU4-39P-201ENST00000362455 GTF2H5Q6ZYL4 71 aa1.45□□□□□ -2.18
RNU4-39P-201ENST00000362455 LINC00643Q86TS7 51 aa1.45□□□□□ -2.18
RNU4-39P-201ENST00000362455 COX7CP15954 63 aa1.43□□□□□ -2.18
RNU4-39P-201ENST00000362455 SPATA8Q6RVD6 105 aa1.43□□□□□ -2.18
RNU4-39P-201ENST00000362455 SPTSSBQ8NFR3 76 aa1.42□□□□□ -2.18
RNU4-39P-201ENST00000362455 CHKB-CPT1BH3BT56 60 aa1.4□□□□□ -2.19
RNU4-39P-201ENST00000362455 J3QR89 54 aa1.38□□□□□ -2.19
RNU4-39P-201ENST00000362455 CCDC179H3BU77 68 aa1.36□□□□□ -2.19
RNU4-39P-201ENST00000362455 TNP1P09430 55 aa1.36□□□□□ -2.19
RNU4-39P-201ENST00000362455 KRTAP6-1Q3LI64 71 aa1.36□□□□□ -2.19
RNU4-39P-201ENST00000362455 MIR22HGQ0VDD5 57 aa1.34□□□□□ -2.19
RNU4-39P-201ENST00000362455 BRK1Q8WUW1 75 aa1.34□□□□□ -2.19
RNU4-39P-201ENST00000362455 MT1AP04731 61 aa1.33□□□□□ -2.2
RNU4-39P-201ENST00000362455 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
RNU4-39P-201ENST00000362455 SERP1Q9Y6X1 66 aa1.3□□□□□ -2.2
RNU4-39P-201ENST00000362455 ATP5EP56381 51 aaPredicted RBP1.23□□□□□ -2.21
RNU4-39P-201ENST00000362455 SERP2Q8N6R1 65 aa1.22□□□□□ -2.21
RNU4-39P-201ENST00000362455 A0A1B0GU69 56 aa1.21□□□□□ -2.22
RNU4-39P-201ENST00000362455 H7BZZ5 65 aa1.19□□□□□ -2.22
RNU4-39P-201ENST00000362455 LINC01558Q9Y6Z2 57 aa1.11□□□□□ -2.23
RNU4-39P-201ENST00000362455 PRR15LQ9BU68 103 aa1.09□□□□□ -2.23
RNU4-39P-201ENST00000362455 UQCR11O14957 56 aa1.07□□□□□ -2.24
RNU4-39P-201ENST00000362455 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
RNU4-39P-201ENST00000362455 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
RNU4-39P-201ENST00000362455 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
RNU4-39P-201ENST00000362455 PRM1P04553 51 aa0.5□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 80.6 ms