RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
COL11A2-202ENST00000361917 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
COL11A2-202ENST00000361917 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
COL11A2-202ENST00000361917 FLGP20930 4061 aaPredicted RBP4.47□□□□□ -1.69
COL11A2-202ENST00000361917 MUC17Q685J3 4493 aa4.47□□□□□ -1.69
COL11A2-202ENST00000361917 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
COL11A2-202ENST00000361917 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
COL11A2-202ENST00000361917 EPPK1P58107 5090 aaKnown RBP4.36□□□□□ -1.71
COL11A2-202ENST00000361917 LCE2AQ5TA79 106 aaPredicted RBP4.34□□□□□ -1.71
COL11A2-202ENST00000361917 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
COL11A2-202ENST00000361917 MT1AP04731 61 aa4.27□□□□□ -1.73
COL11A2-202ENST00000361917 KRTAP19-7Q3SYF9 63 aa4.26□□□□□ -1.73
COL11A2-202ENST00000361917 LCE5AQ5TCM9 118 aa4.24□□□□□ -1.73
COL11A2-202ENST00000361917 ABCA13Q86UQ4 5058 aa4.21□□□□□ -1.73
COL11A2-202ENST00000361917 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.73
COL11A2-202ENST00000361917 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.73
COL11A2-202ENST00000361917 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.73
COL11A2-202ENST00000361917 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
COL11A2-202ENST00000361917 HMCN2Q8NDA2 5059 aa4.16□□□□□ -1.74
COL11A2-202ENST00000361917 KRTAP6-3Q3LI67 103 aa4.14□□□□□ -1.75
COL11A2-202ENST00000361917 SYNE1Q8NF91 8797 aaKnown RBP4.11□□□□□ -1.75
COL11A2-202ENST00000361917 RNF213Q63HN8 5207 aa4.09□□□□□ -1.76
COL11A2-202ENST00000361917 FSIP2Q5CZC0 6907 aa4.09□□□□□ -1.76
COL11A2-202ENST00000361917 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
COL11A2-202ENST00000361917 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
COL11A2-202ENST00000361917 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
COL11A2-202ENST00000361917 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
COL11A2-202ENST00000361917 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
COL11A2-202ENST00000361917 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
COL11A2-202ENST00000361917 UBR4Q5T4S7 5183 aa4.03□□□□□ -1.76
COL11A2-202ENST00000361917 KRTAP9-1A8MXZ3 250 aaPredicted RBP4□□□□□ -1.77
COL11A2-202ENST00000361917 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
COL11A2-202ENST00000361917 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
COL11A2-202ENST00000361917 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
COL11A2-202ENST00000361917 LCE1CQ5T751 118 aa3.9□□□□□ -1.78
COL11A2-202ENST00000361917 LCE1EQ5T753 118 aa3.9□□□□□ -1.78
COL11A2-202ENST00000361917 LCE1FQ5T754 118 aa3.9□□□□□ -1.78
COL11A2-202ENST00000361917 MUC2Q02817 5179 aa3.89□□□□□ -1.79
COL11A2-202ENST00000361917 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
COL11A2-202ENST00000361917 FCGBPQ9Y6R7 5405 aaPredicted RBP3.55□□□□□ -1.84
COL11A2-202ENST00000361917 KMT2DO14686 5537 aa3.54□□□□□ -1.84
COL11A2-202ENST00000361917 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
COL11A2-202ENST00000361917 USH2AO75445 5202 aa3.49□□□□□ -1.85
COL11A2-202ENST00000361917 KRTAP4-11Q9BYQ6 195 aa3.46□□□□□ -1.86
COL11A2-202ENST00000361917 KRTAP5-9P26371 169 aa3.4□□□□□ -1.86
COL11A2-202ENST00000361917 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
COL11A2-202ENST00000361917 MACF1Q9UPN3 7388 aaKnown RBP3.33□□□□□ -1.88
COL11A2-202ENST00000361917 NEBP20929 6669 aa3.33□□□□□ -1.88
COL11A2-202ENST00000361917 KRTAP4-6Q9BYQ5 205 aa3.32□□□□□ -1.88
COL11A2-202ENST00000361917 SSPOA2VEC9 5147 aa3.27□□□□□ -1.89
COL11A2-202ENST00000361917 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
COL11A2-202ENST00000361917 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
COL11A2-202ENST00000361917 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
COL11A2-202ENST00000361917 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
COL11A2-202ENST00000361917 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
COL11A2-202ENST00000361917 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
COL11A2-202ENST00000361917 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
COL11A2-202ENST00000361917 MDN1Q9NU22 5596 aa3.04□□□□□ -1.92
COL11A2-202ENST00000361917 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
COL11A2-202ENST00000361917 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
COL11A2-202ENST00000361917 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
COL11A2-202ENST00000361917 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
COL11A2-202ENST00000361917 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
COL11A2-202ENST00000361917 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
COL11A2-202ENST00000361917 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
COL11A2-202ENST00000361917 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
COL11A2-202ENST00000361917 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
COL11A2-202ENST00000361917 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
COL11A2-202ENST00000361917 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
COL11A2-202ENST00000361917 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.07
COL11A2-202ENST00000361917 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
COL11A2-202ENST00000361917 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
COL11A2-202ENST00000361917 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
COL11A2-202ENST00000361917 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
COL11A2-202ENST00000361917 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
COL11A2-202ENST00000361917 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
COL11A2-202ENST00000361917 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 113.3 ms