RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 KRTAP19-7Q3SYF9 63 aa6.62□□□□□ -1.35
CMTM3-201ENST00000361909 MT1EP04732 61 aa6.5□□□□□ -1.37
CMTM3-201ENST00000361909 KRTAP9-6A0A140TA67 174 aa6.38□□□□□ -1.39
CMTM3-201ENST00000361909 MACF1Q9UPN3 7388 aaKnown RBP6.38□□□□□ -1.39
CMTM3-201ENST00000361909 MT1LQ93083 61 aa6.38□□□□□ -1.39
CMTM3-201ENST00000361909 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
CMTM3-201ENST00000361909 SPRR2FQ96RM1 72 aa6.31□□□□□ -1.4
CMTM3-201ENST00000361909 KRTAP5-9P26371 169 aa6.28□□□□□ -1.4
CMTM3-201ENST00000361909 KRTAP19-3Q7Z4W3 81 aa6.25□□□□□ -1.41
CMTM3-201ENST00000361909 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
CMTM3-201ENST00000361909 MT1GP13640 62 aa6.22□□□□□ -1.41
CMTM3-201ENST00000361909 SYNE2Q8WXH0 6885 aaKnown RBP6.19□□□□□ -1.42
CMTM3-201ENST00000361909 MUC12Q9UKN1 5478 aa6.14□□□□□ -1.43
CMTM3-201ENST00000361909 KRTAP6-3Q3LI67 103 aa6.14□□□□□ -1.43
CMTM3-201ENST00000361909 LCE5AQ5TCM9 118 aa6.14□□□□□ -1.43
CMTM3-201ENST00000361909 MT1MQ8N339 61 aa6.11□□□□□ -1.43
CMTM3-201ENST00000361909 LCE1AQ5T7P2 110 aa6.05□□□□□ -1.44
CMTM3-201ENST00000361909 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
CMTM3-201ENST00000361909 SPRR2EP22531 72 aa5.98□□□□□ -1.45
CMTM3-201ENST00000361909 SPRR2BP35325 72 aa5.98□□□□□ -1.45
CMTM3-201ENST00000361909 SPRR2AP35326 72 aa5.98□□□□□ -1.45
CMTM3-201ENST00000361909 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
CMTM3-201ENST00000361909 MDN1Q9NU22 5596 aa5.9□□□□□ -1.47
CMTM3-201ENST00000361909 LOC100996750A0A140TA64 210 aa5.9□□□□□ -1.47
CMTM3-201ENST00000361909 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
CMTM3-201ENST00000361909 SPRR2DP22532 72 aa5.76□□□□□ -1.49
CMTM3-201ENST00000361909 MT1AP04731 61 aa5.72□□□□□ -1.49
CMTM3-201ENST00000361909 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
CMTM3-201ENST00000361909 NEBP20929 6669 aa5.61□□□□□ -1.51
CMTM3-201ENST00000361909 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
CMTM3-201ENST00000361909 KRTAP5-5Q701N2 237 aaPredicted RBP5.53□□□□□ -1.52
CMTM3-201ENST00000361909 LCE3DQ9BYE3 92 aa5.49□□□□□ -1.53
CMTM3-201ENST00000361909 LCE3EQ5T5B0 92 aa5.49□□□□□ -1.53
CMTM3-201ENST00000361909 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
CMTM3-201ENST00000361909 PRM1P04553 51 aa5.39□□□□□ -1.55
CMTM3-201ENST00000361909 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
CMTM3-201ENST00000361909 KRTAP5-4Q6L8H1 288 aa5.26□□□□□ -1.57
CMTM3-201ENST00000361909 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
CMTM3-201ENST00000361909 SYNE1Q8NF91 8797 aaKnown RBP5.22□□□□□ -1.57
CMTM3-201ENST00000361909 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.58
CMTM3-201ENST00000361909 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
CMTM3-201ENST00000361909 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
CMTM3-201ENST00000361909 KRTAP6-2Q3LI66 62 aa5.09□□□□□ -1.59
CMTM3-201ENST00000361909 MT4P47944 62 aa4.97□□□□□ -1.61
CMTM3-201ENST00000361909 KRTAP4-6Q9BYQ5 205 aa4.96□□□□□ -1.62
CMTM3-201ENST00000361909 MT3P25713 68 aa4.93□□□□□ -1.62
CMTM3-201ENST00000361909 LCE1DQ5T752 114 aa4.9□□□□□ -1.62
CMTM3-201ENST00000361909 KRTAP20-2Q3LI61 65 aa4.89□□□□□ -1.63
CMTM3-201ENST00000361909 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
CMTM3-201ENST00000361909 HMCN1Q96RW7 5635 aa4.76□□□□□ -1.65
CMTM3-201ENST00000361909 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
CMTM3-201ENST00000361909 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
CMTM3-201ENST00000361909 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
CMTM3-201ENST00000361909 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
CMTM3-201ENST00000361909 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
CMTM3-201ENST00000361909 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
CMTM3-201ENST00000361909 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
CMTM3-201ENST00000361909 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
CMTM3-201ENST00000361909 LCE1CQ5T751 118 aa4□□□□□ -1.77
CMTM3-201ENST00000361909 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
CMTM3-201ENST00000361909 KRTAP5-7Q6L8G8 165 aa4□□□□□ -1.77
CMTM3-201ENST00000361909 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
CMTM3-201ENST00000361909 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
CMTM3-201ENST00000361909 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.78
CMTM3-201ENST00000361909 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
CMTM3-201ENST00000361909 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
CMTM3-201ENST00000361909 KRTAP21-1Q3LI58 79 aa3.52□□□□□ -1.85
CMTM3-201ENST00000361909 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
CMTM3-201ENST00000361909 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
CMTM3-201ENST00000361909 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
CMTM3-201ENST00000361909 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
CMTM3-201ENST00000361909 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
CMTM3-201ENST00000361909 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
CMTM3-201ENST00000361909 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
CMTM3-201ENST00000361909 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
CMTM3-201ENST00000361909 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
CMTM3-201ENST00000361909 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 115 ms