RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 PRM1P04553 51 aa3.26□□□□□ -1.89
HIPK1-202ENST00000361587 HMCN2Q8NDA2 5059 aa3.23□□□□□ -1.89
HIPK1-202ENST00000361587 RNF213Q63HN8 5207 aa3.2□□□□□ -1.9
HIPK1-202ENST00000361587 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
HIPK1-202ENST00000361587 FAT4Q6V0I7 4981 aa3.17□□□□□ -1.9
HIPK1-202ENST00000361587 MT4P47944 62 aa3.15□□□□□ -1.91
HIPK1-202ENST00000361587 LCE2AQ5TA79 106 aaPredicted RBP3.14□□□□□ -1.91
HIPK1-202ENST00000361587 MT1AP04731 61 aa3.12□□□□□ -1.91
HIPK1-202ENST00000361587 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
HIPK1-202ENST00000361587 LOC100996750A0A140TA64 210 aa3.1□□□□□ -1.91
HIPK1-202ENST00000361587 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
HIPK1-202ENST00000361587 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
HIPK1-202ENST00000361587 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
HIPK1-202ENST00000361587 KRTAP2-1Q9BYU5 128 aa3.04□□□□□ -1.92
HIPK1-202ENST00000361587 KRTAP9-6A0A140TA67 174 aa3.04□□□□□ -1.92
HIPK1-202ENST00000361587 KRTAP9-2Q9BYQ4 174 aa3.04□□□□□ -1.92
HIPK1-202ENST00000361587 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
HIPK1-202ENST00000361587 KRTAP19-7Q3SYF9 63 aa3.01□□□□□ -1.93
HIPK1-202ENST00000361587 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
HIPK1-202ENST00000361587 MUC2Q02817 5179 aa2.97□□□□□ -1.93
HIPK1-202ENST00000361587 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
HIPK1-202ENST00000361587 LCE1AQ5T7P2 110 aa2.91□□□□□ -1.94
HIPK1-202ENST00000361587 KRTAP4-9Q9BYQ8 210 aa2.89□□□□□ -1.95
HIPK1-202ENST00000361587 KRTAP9-6A8MVA2 160 aa2.87□□□□□ -1.95
HIPK1-202ENST00000361587 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
HIPK1-202ENST00000361587 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
HIPK1-202ENST00000361587 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
HIPK1-202ENST00000361587 LCE4AQ5TA78 99 aa2.82□□□□□ -1.96
HIPK1-202ENST00000361587 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
HIPK1-202ENST00000361587 KRTAP6-3Q3LI67 103 aa2.79□□□□□ -1.96
HIPK1-202ENST00000361587 KRTAP9-7A8MTY7 169 aa2.77□□□□□ -1.97
HIPK1-202ENST00000361587 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
HIPK1-202ENST00000361587 USH2AO75445 5202 aa2.71□□□□□ -1.98
HIPK1-202ENST00000361587 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
HIPK1-202ENST00000361587 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
HIPK1-202ENST00000361587 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
HIPK1-202ENST00000361587 KRTAP2-2Q9BYT5 123 aa2.66□□□□□ -1.98
HIPK1-202ENST00000361587 FSIP2Q5CZC0 6907 aa2.66□□□□□ -1.98
HIPK1-202ENST00000361587 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.64□□□□□ -1.99
HIPK1-202ENST00000361587 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
HIPK1-202ENST00000361587 SYNE2Q8WXH0 6885 aaKnown RBP2.51□□□□□ -2.01
HIPK1-202ENST00000361587 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
HIPK1-202ENST00000361587 KRTAP5-9P26371 169 aa2.48□□□□□ -2.01
HIPK1-202ENST00000361587 KMT2DO14686 5537 aa2.47□□□□□ -2.01
HIPK1-202ENST00000361587 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
HIPK1-202ENST00000361587 FCGBPQ9Y6R7 5405 aaPredicted RBP2.44□□□□□ -2.02
HIPK1-202ENST00000361587 MACF1Q9UPN3 7388 aaKnown RBP2.37□□□□□ -2.03
HIPK1-202ENST00000361587 KRTAP4-11Q9BYQ6 195 aa2.34□□□□□ -2.03
HIPK1-202ENST00000361587 MUC12Q9UKN1 5478 aa2.3□□□□□ -2.04
HIPK1-202ENST00000361587 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
HIPK1-202ENST00000361587 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
HIPK1-202ENST00000361587 DSTQ03001 7570 aaKnown RBP2.23□□□□□ -2.05
HIPK1-202ENST00000361587 NEBP20929 6669 aa2.21□□□□□ -2.06
HIPK1-202ENST00000361587 KRTAP4-6Q9BYQ5 205 aa2.19□□□□□ -2.06
HIPK1-202ENST00000361587 MDN1Q9NU22 5596 aa2.14□□□□□ -2.07
HIPK1-202ENST00000361587 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
HIPK1-202ENST00000361587 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
HIPK1-202ENST00000361587 KRTAP4-12Q9BQ66 201 aa2.02□□□□□ -2.09
HIPK1-202ENST00000361587 KRTAP4-2Q9BYR5 136 aa2.02□□□□□ -2.09
HIPK1-202ENST00000361587 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
HIPK1-202ENST00000361587 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
HIPK1-202ENST00000361587 KRTAP5-2Q701N4 177 aa1.84□□□□□ -2.11
HIPK1-202ENST00000361587 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.12
HIPK1-202ENST00000361587 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
HIPK1-202ENST00000361587 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
HIPK1-202ENST00000361587 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
HIPK1-202ENST00000361587 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
HIPK1-202ENST00000361587 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
HIPK1-202ENST00000361587 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
HIPK1-202ENST00000361587 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
HIPK1-202ENST00000361587 KRTAP5-11Q6L8G4 156 aa1.51□□□□□ -2.17
HIPK1-202ENST00000361587 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
HIPK1-202ENST00000361587 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
HIPK1-202ENST00000361587 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
HIPK1-202ENST00000361587 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
HIPK1-202ENST00000361587 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
HIPK1-202ENST00000361587 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
HIPK1-202ENST00000361587 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms